DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Yp1 and lipca

DIOPT Version :10

Sequence 1:NP_511103.1 Gene:Yp1 / 31939 FlyBaseID:FBgn0004045 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_957316.1 Gene:lipca / 393997 ZFINID:ZDB-GENE-040426-1361 Length:514 Species:Danio rerio


Alignment Length:212 Identity:61/212 - (28%)
Similarity:100/212 - (47%) Gaps:32/212 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 KTQSGDIIVIDLGSKLNTYERYAMLDIEKTGAKIGKWIVQMVNELD----MPFDTIHLIGQNVGA 258
            |:..|:|.|: :...|....::..:..:.|.. :|:.|..:::.|:    .|...:||||.::||
Zfish   105 KSSEGNINVL-IADWLTLAHQHYPIAAQNTRI-VGQDIAHLLSWLEDFKQFPLGKVHLIGYSLGA 167

  Fly   259 HVAGAAAQEFTRLTGHKLRRVTGLDPSKIVAKSKNTLTGLARGDAEFVDAIHT--------SVYG 315
            |::|.|..... ::|..|.|:|||||:..:.:..:....|:..||:|||||||        || |
Zfish   168 HISGFAGSNLA-MSGRTLGRITGLDPAGPMFEGMSHTDRLSPEDAKFVDAIHTFTLQRMGLSV-G 230

  Fly   316 MGTPIRSGDVDFYPNGPAAGVPGA----SNV-VEAAMRATRYFAESVRPGNERSFPAVPANSLQQ 375
            :..|:  ...|||||| .:..||.    .|: ...|......|.::|:..:||:......:.|.:
Zfish   231 IKQPV--AHFDFYPNG-GSFQPGCQLHMQNIYAHLAQHGIMGFEQTVKCAHERAVHLFIDSLLNK 292

  Fly   376 YKQ--------NDGFGK 384
            .||        |..|.|
Zfish   293 DKQIMAYKCSDNTAFDK 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yp1NP_511103.1 Lipase 129..410 CDD:395099 61/212 (29%)
lipcaNP_957316.1 lipo_lipase 44..488 CDD:132274 61/212 (29%)

Return to query results.
Submit another query.