DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Yp1 and LOC100331214

DIOPT Version :9

Sequence 1:NP_001285071.1 Gene:Yp1 / 31939 FlyBaseID:FBgn0004045 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_002666287.3 Gene:LOC100331214 / 100331214 -ID:- Length:501 Species:Danio rerio


Alignment Length:194 Identity:60/194 - (30%)
Similarity:97/194 - (50%) Gaps:28/194 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 EDYSEEVKNA---KTQSGDIIVIDLGSKLNTYERYAMLDIEKT---GAKIGKWIVQMVNELDMPF 246
            |.:.|::..|   :.:..::||:|.   |:|.:.:.::..:.|   |.:||.:|..:....::|.
Zfish   103 ESWVEKLVAALYNREKDANVIVVDW---LDTAQDHYVVAAQNTKMVGREIGLFIDWIEETSNVPL 164

  Fly   247 DTIHLIGQNVGAHVAGAAAQEFTRLTGHKLRRVTGLDPSKIVAKSKNTLTGLARGDAEFVDAIHT 311
            :.:||||.::||||||.|...    |.:|:.|:|||||:....:..:....|:..||.|||.:||
Zfish   165 ENLHLIGYSLGAHVAGFAGSH----TTNKIGRITGLDPAGPDFEGVHAHGRLSPDDAHFVDVLHT 225

  Fly   312 SVYG-----MGTPIRSGDVDFYPNG----PAAGVPGASNVVEAAMRATRYFA--ESVRPGNERS 364
            ...|     :|.....|.||.||||    |...:.||..    .|.:...||  .::|..:|||
Zfish   226 FTRGSLGLSIGIEQPVGHVDIYPNGGSFQPGCNLRGALE----KMASYGIFAINNAIRCEHERS 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yp1NP_001285071.1 Abhydrolase 183..406 CDD:304388 60/194 (31%)
LOC100331214XP_002666287.3 lipo_lipase 47..487 CDD:132274 60/194 (31%)
Pancreat_lipase_like 51..347 CDD:238363 60/194 (31%)
PLAT_LPL 355..485 CDD:238856
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28N19
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.