DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and Ctbs

DIOPT Version :10

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_112285.1 Gene:Ctbs / 81652 RGDID:621338 Length:367 Species:Rattus norvegicus


Alignment Length:350 Identity:82/350 - (23%)
Similarity:130/350 - (37%) Gaps:77/350 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KPFDKYQDIEQGGYAKFTGLKTYN----KQLKTMIAIGGWNE-----ASSRFSPLVASNE----- 126
            :|...::|.|.  :....|.||:.    .|:.|:...|.::.     |.|:.:.:|...:     
  Rat    35 RPIRHHRDFEV--FVFDVGQKTWKSYDWSQITTVAVFGKYDSELMCYAHSKGARVVLKGDVALKD 97

  Fly   127 -----RRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKT 186
                 .|..:|...:...:..|.|||::|.|   ......|.:.:.....|:|....|.||.|.:
  Rat    98 IINPTFRASWIAQKVALAKAQHMDGINIDIE---QEVDCSSPEYEALTALVRETTEGFHREIEGS 159

  Fly   187 GRTRLLLTMAV---PAGIEYIDKGYDVPKLNKYLDWFNVLTYDFHSS--HEPSVNHHAPLYSLEE 246
                 .:|..|   |.||:  .:.|:...:....|:..|::||..|.  .|.....:||      
  Rat   160 -----QVTFDVAWSPKGID--KRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAP------ 211

  Fly   247 DSEYNYDAELNIDYSIKYYLKAGADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATR 311
               ||.......|     ||:.|....|||:|||.||..|..:|....::.|.|:.|......:.
  Rat   212 ---YNQTLTGYGD-----YLRMGISPRKLVMGIPWYGYDYICLNLSKDDVCAIAKVPFRGAPCSD 268

  Fly   312 EKGYLAYYEICQTLKDDPEWTVVQPNANVMGP----------YAYR----RNQWVGYDDEAIVRK 362
            ..|:...|.:          .:.|.|::|.|.          |.|:    |...|.||:...:..
  Rat   269 AAGHQVPYRV----------IMKQVNSSVSGSQWNQDQQAPYYNYKDPTGRLHQVWYDNPRSISL 323

  Fly   363 KAEYVVAQGLGGIMFW---AIDNDD 384
            ||.:|...||.||..|   .:|..|
  Rat   324 KAAFVKHYGLRGIGMWNANCLDYSD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 GH18_chitolectin_chitotriosidase 32..404 CDD:119351 81/349 (23%)
CBM_14 506..562 CDD:426342
PHA03247 <3683..3790 CDD:223021
CBM_14 4554..4609 CDD:426342
CtbsNP_112285.1 GH18_chitobiase 23..363 CDD:119354 81/349 (23%)
Blue background indicates that the domain is not in the aligned region.

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