DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and Chia1

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_075675.2 Gene:Chia1 / 81600 MGIID:1932052 Length:473 Species:Mus musculus


Alignment Length:549 Identity:190/549 - (34%)
Similarity:287/549 - (52%) Gaps:85/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFLLCALAYCIN-EASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFTKDNQMK 76
            |.|:..||..:| :..|...::||:|||:.||||...|.|.:|||.|||||:|||.|. ::|::.
Mouse     4 LLLVTGLALLLNAQLGSAYNLICYFTNWAQYRPGLGSFKPDDINPCLCTHLIYAFAGM-QNNEIT 67

  Fly    77 PFDKYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQ 141
            ..: :.|:..  |..|..||..|.:|||::||||||..::.|:.:|::::.||.||.:::|||||
Mouse    68 TIE-WNDVTL--YKAFNDLKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQ 129

  Fly   142 NHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDK 206
            ..|||:|||||||..| |...:|:..:...|:|:|..||:||.::.|.||::|.||..||..|..
Mouse   130 YGFDGLDLDWEYPGSR-GSPPQDKHLFTVLVKEMREAFEQEAIESNRPRLMVTAAVAGGISNIQA 193

  Fly   207 GYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGAD 271
            ||::|:|:||||:.:|:|||.|.|.|.....::|||....::..|  |.||:||.:.|:...||.
Mouse   194 GYEIPELSKYLDFIHVMTYDLHGSWEGYTGENSPLYKYPTETGSN--AYLNVDYVMNYWKNNGAP 256

  Fly   272 RDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPE--WTVV 334
            .:||::|.|.||.::.|.|.....:|||..|.|..|..||:.|:.||||||..|:....  |   
Mouse   257 AEKLIVGFPEYGHTFILRNPSDNGIGAPTSGDGPAGPYTRQAGFWAYYEICTFLRSGATEVW--- 318

  Fly   335 QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGT-CNGKPYPLIE 398
              :|:...||||:.|:|:|||:......||:::.....||.|.||||.|||.|: |:...:||  
Mouse   319 --DASQEVPYAYKANEWLGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPL-- 379

  Fly   399 AAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASNRNRLNGKTEAPLSSRRPSATRRPAVSST 463
              ...:.:|||:.......|..|.:|                                      .
Mouse   380 --TSTLNKALGISTEGCTAPDVPSEP--------------------------------------V 404

  Fly   464 QAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFKCEE-EGFFQHPRDCKKYYWCLDS 527
            ..||.|.:     ..|||   ||.:.           ||.|..:: :|.:....|...::.|:  
Mouse   405 TTPPGSGS-----GGGSS---GGSSG-----------GSGFCADKADGLYPVADDRNAFWQCI-- 448

  Fly   528 GPSGLGIVAHMFTCPSGLYFNPAADSCDF 556
              :|:....|   |.:||.|:.:.:.|::
Mouse   449 --NGITYQQH---CQAGLVFDTSCNCCNW 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 150/353 (42%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 157/374 (42%)
CBM_14 506..562 CDD:279884 10/52 (19%)
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
Chia1NP_075675.2 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 157/378 (42%)
Glyco_18 24..365 CDD:214753 150/352 (43%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 70..71 0/1 (0%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 97..100 2/2 (100%)
Chitooligosaccharide binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU01258 210..213 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..421 11/72 (15%)
ChtBD2 426..473 CDD:214696 11/54 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2066
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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