DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and ctbs

DIOPT Version :10

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_001011500.1 Gene:ctbs / 497004 XenbaseID:XB-GENE-975891 Length:369 Species:Xenopus tropicalis


Alignment Length:395 Identity:94/395 - (23%)
Similarity:151/395 - (38%) Gaps:84/395 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LCTHLVYAFGGFTKDNQMKPFDKYQDIE-QGGYAKFTGLKTYNKQLKTMIAIGGWNE------AS 115
            ||..|..|....|.....:|....:|.| ...|.|....|.|:....|.||:.|..:      |.
 Frog    18 LCVSLCAAGCPCTDPRLCEPITDSRDFEVLVFYTKGKNWKFYDWSQVTTIALFGKYDPELLCFAH 82

  Fly   116 SRFS----------PLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGGKSRDRDNYA- 169
            |:.:          |.:...:.|..:|...::..:....|||:||.|     :.......:.|| 
 Frog    83 SKGARLVLKGDVPLPYIVDLKNRTSWITQKVELAKSQFMDGINLDIE-----QSVLKGSPEYYAL 142

  Fly   170 -QFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYID-KGYDVPKLNKYLDWFNVLTYDFHSS-- 230
             ..|:|....|.||...:     .:|..|....:.:| :.|:...:.:..|:..|::||..|.  
 Frog   143 TALVEETTEAFHREIPGS-----QVTFDVAWSPDCVDERCYNYTGIAESCDFLFVMSYDEQSQIW 202

  Fly   231 HEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLVLGIPTYGRSYTLINEESTE 295
            .|...:.::||.  :..|.|....:|:|            |..|||:|:|.||..|..::.|...
 Frog   203 TECVASANSPLN--KTLSGYQKFTQLDI------------DPKKLVMGVPWYGYDYPCLDLEDNN 253

  Fly   296 L--------GAP-AEGPGEQGDATREKGYLAYYEICQTLKDDPE---WTVVQPNANVMGP-YAYR 347
            .        ||| ::..|:|         :.|.:|.:.:.....   |..||.:     | |.|:
 Frog   254 CTLKEVPFRGAPCSDAAGKQ---------IPYSKITKQVNSSLTGRLWDDVQKS-----PFYNYK 304

  Fly   348 --RNQW--VGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGKPYPLIEAAKEAMVEAL 408
              :.|:  |.|||...:..|:.|:...||.||..|..|..|:      ...|:.|...:.|..||
 Frog   305 DAKGQFHQVWYDDPVSISLKSAYIKKLGLRGIGMWNGDLLDY------SQDPIAETQTKDMWNAL 363

  Fly   409 -GLGI 412
             |:|:
 Frog   364 KGVGL 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 GH18_chitolectin_chitotriosidase 32..404 CDD:119351 89/384 (23%)
CBM_14 506..562 CDD:426342
PHA03247 <3683..3790 CDD:223021
CBM_14 4554..4609 CDD:426342
ctbsNP_001011500.1 GH18_chitobiase 9..363 CDD:119354 90/388 (23%)
Blue background indicates that the domain is not in the aligned region.

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