DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and chia.3

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_998378.1 Gene:chia.3 / 406819 ZFINID:ZDB-GENE-040426-2891 Length:471 Species:Danio rerio


Alignment Length:548 Identity:193/548 - (35%)
Similarity:274/548 - (50%) Gaps:105/548 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFD 79
            :||.:|:.:..|       ||:||||.||||..|:.|.|::|||||||:|||....:.|::.   
Zfish    13 VLCHVAFSMEMA-------CYFTNWSQYRPGIGKYTPANVDPYLCTHLIYAFSIINQRNELV--- 67

  Fly    80 KYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHF 144
            .|:..::..|..|..||..|..|||::|:||||..|::||.:|::...|:.||::.:||||.:.|
Zfish    68 TYEWNDETLYKAFNELKNKNPTLKTLLAVGGWNFGSAQFSIMVSNPANRKTFIQSTIKFLRTHGF 132

  Fly   145 DGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYD 209
            ||:|||||||..| |....|:..:....:||.|.:|.|::.||..:|:||.||.||...||.||:
Zfish   133 DGLDLDWEYPGAR-GSPPEDKQRFTLLCKELVAAYEAESKATGNPQLMLTAAVSAGKGTIDDGYE 196

  Fly   210 VPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAEL---NIDYSIKYYLKAGAD 271
            :.::.|||::.||:|||||.:.|....|::|||...:|     :.:|   |.||:::|:...|..
Zfish   197 IAEIAKYLNFINVMTYDFHGTWERFTGHNSPLYQGSKD-----EGDLIYFNTDYAMRYWRDNGTP 256

  Fly   272 RDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVVQP 336
            .:||.:|...|||::.|.:.: |.:||||.||...|..|||.|:.:|||||..|    |.|.:|.
Zfish   257 VEKLRMGFAAYGRTFRLTSSD-TSVGAPASGPASAGTYTREAGFWSYYEICGFL----EGTTIQW 316

  Fly   337 NANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGT-CNGKPYPLIEAA 400
            ..:...|||.:.::|||:|.:.....|..|:..:..||...||:|.|||.|. |:...:||:   
Zfish   317 IDDQKVPYATKNSEWVGFDTKESYETKVRYLKDKNFGGAFVWALDLDDFAGQFCSQGNHPLM--- 378

  Fly   401 KEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASNRNRLNGKTEAPLSSRRPSATRRPAVSSTQA 465
                                            |..||.|:  .|.|                   
Zfish   379 --------------------------------AHLRNLLD--IELP------------------- 390

  Fly   466 PPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFKC--EEEGFFQHPRDCKKYYWCLDSG 528
            |.||||   |...|.|.    ...||....||..||..| |  :.:|.:.||.|..|||.|..  
Zfish   391 PMPSTT---TPKPGQST----TRPTTTTTTTTHAPGPGF-CNGKPDGLYAHPNDPNKYYSCAG-- 445

  Fly   529 PSGLGIVAHMFT--CPSGLYFNPAADSC 554
                   .|.|.  |..|..|:   |||
Zfish   446 -------GHTFVEKCAVGTVFD---DSC 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 144/354 (41%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 151/375 (40%)
CBM_14 506..562 CDD:279884 17/53 (32%)
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
chia.3NP_998378.1 Glyco_18 24..363 CDD:214753 145/359 (40%)
GH18_chitolectin_chitotriosidase 25..385 CDD:119351 154/408 (38%)
ChtBD2 421..469 CDD:214696 18/56 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2066
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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