DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and Cht12

DIOPT Version :10

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_726022.1 Gene:Cht12 / 246535 FlyBaseID:FBgn0050293 Length:470 Species:Drosophila melanogaster


Alignment Length:557 Identity:153/557 - (27%)
Similarity:241/557 - (43%) Gaps:138/557 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFLLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFG-GFTKDN-QM 75
            :||:|.   ||   :.|..|.|.|...|.|..|.::|...:::..||||||...| |...|: ::
  Fly    12 IFLICG---CI---AKEYNVFCQYDLGSYYYKGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGEL 70

  Fly    76 KPFDKYQDIEQGGYAKFTGLKT--YNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKF 138
            :..||...:|:.   |.:.:||  ::...|.|..||||.|.||.||.:|||.::|..|..::|:|
  Fly    71 RITDKILLLEKD---KLSSVKTMKWDSIKKVMFTIGGWEEDSSSFSRMVASPKKRDNFYSSMLEF 132

  Fly   139 LRQNHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIE- 202
            :.:..|||:.:||.||. ..||...||.|:...::||...|.       :.:|:|.:||....: 
  Fly   133 MFRWGFDGVQIDWRYPT-LLGGHPDDRQNFVILLEELGLIFR-------KNQLILMVAVLGRRDN 189

  Fly   203 YIDKGYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLK 267
            .|.:.|::|::..:.|:.:::.:|....:...:.::|||...|.          ::..||.::.:
  Fly   190 RILESYNIPEIVNHSDFIHLMMHDEQDPYHLRLAYNAPLVGYEG----------SVTDSIMHWKR 244

  Fly   268 AGADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPEWT 332
            .|...:||:||||.:.||:|:...:|| :|:..:|||.|...:...|::.|.|.|   ....:|:
  Fly   245 NGGAPEKLILGIPLFVRSFTMDRNQST-VGSACKGPGRQTKQSHRPGFMTYNEWC---VQQSKWS 305

  Fly   333 -VVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGKPYPL 396
             :....|.|  |||.|.:|||.|::...:..|...:....|||.|.|.||.|||||.| |:.:.|
  Fly   306 RMFDQLAKV--PYATRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAWTIDVDDFRGRC-GEQHGL 367

  Fly   397 IEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASNRNRLNGKTEAPLSSRRPSATRRPAVS 461
            :.....|:.:..||                               .||.|               
  Fly   368 LRVIFSALGDKNGL-------------------------------TTEKP--------------- 386

  Fly   462 STQAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFKCEEEGFFQHPRDCKKYYWCLD 526
                        .|||.|                         .|..:||.:...||:.|:.|.|
  Fly   387 ------------TTEASG-------------------------LCPHDGFSRDGWDCRLYHECRD 414

  Fly   527 SGPSGLGIVAHMFTCPSGLYFN-------PAAD-SCD 555
                |..|   .:.|..|.||:       |||: .||
  Fly   415 ----GERI---YYECLEGQYFDENQIVCRPAAEVKCD 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 GH18_chitolectin_chitotriosidase 32..404 CDD:119351 118/377 (31%)
CBM_14 506..562 CDD:426342 19/58 (33%)
PHA03247 <3683..3790 CDD:223021
CBM_14 4554..4609 CDD:426342
Cht12NP_726022.1 GH18_chitinase-like 25..375 CDD:471972 118/377 (31%)
ChtBD2 394..438 CDD:214696 14/50 (28%)
Blue background indicates that the domain is not in the aligned region.

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