DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and cht-4

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:372 Identity:97/372 - (26%)
Similarity:177/372 - (47%) Gaps:46/372 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGG-FTKDNQMKPFDKYQDIEQGGYAKFTGL 95
            |.|||.   :.:|..:|. |:|    ||||::..... .::|.:::.|:  ||:|.     |:.|
 Worm    20 VACYYI---LNQPDISKV-PKN----LCTHIILINSAHVSEDGRLQGFE--QDLEH-----FSEL 69

  Fly    96 KTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGG 160
              ::.:::..::|...|.:   ||.|.::......|...:.:.|::...:|:|:|||:|......
 Worm    70 --FDGKIELFVSITSSNPS---FSFLTSNTTLMHNFSSTVTQVLQKYRLNGVDIDWEFPVWSRDA 129

  Fly   161 KSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLDWFNVLTY 225
            :..|:.::|.|::.|::.. :.|:      |.|::||........|.|||..|..|.|...::.|
 Worm   130 QKSDKAHFATFLRILKSHL-KPAD------LKLSVAVSGPPTISRKAYDVDALKMYADMVQIMNY 187

  Fly   226 DFHSSH---EPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLVLGIPTYGRSYT 287
            |||..:   .|.|..:|||:.:.  :|.:...|:|.:.|:|.:...|..|:....|||||.|::.
 Worm   188 DFHVFNRYSNPFVGFNAPLHPMR--AEISVLGEMNAEASMKTWYDLGLPRNISFFGIPTYARAFQ 250

  Fly   288 LINEESTELGAPAEGPGEQGDATREKGYLAYY-EICQTLKDDPEWTVVQPNANVMGPYAYRRNQ- 350
            |:.....:..:|         |.|.:..:... ::| .......:|.|. |.:...||.|..:. 
 Worm   251 LLTHYLHKPYSP---------AIRARPEITNLPDVC-IFAQSGYYTTVW-NHHAQAPYLYGDDGI 304

  Fly   351 WVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGKPYPLI 397
            ||.|:::..:..|..:.....:||:|.::|.:||..|.|...||||:
 Worm   305 WVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 89/356 (25%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 97/372 (26%)
CBM_14 506..562 CDD:279884
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 92/359 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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