DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and chil-6

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_496126.1 Gene:chil-6 / 182436 WormBaseID:WBGene00007471 Length:460 Species:Caenorhabditis elegans


Alignment Length:382 Identity:85/382 - (22%)
Similarity:161/382 - (42%) Gaps:80/382 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ASSEGRVVCYYTNWSVYRPGTAKFNPQNINP---YLCTHLVYAFGGFTKDNQMKPFDKYQDIEQG 87
            ||...|:|.|:          |:|....::.   .:.||::|.| ...|:..:    .::|  :.
 Worm   108 ASCGKRIVGYF----------AEFENSPLSKKQLQMLTHIIYLF-AIPKNGSL----TFRD--ES 155

  Fly    88 GYAKFTGLKTYNKQ----LKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGID 148
            ...||..:|...::    ||.||:||| ..:|..||.||:....|..|..:|:.|::....||:|
 Worm   156 SRRKFVAMKNEARKESSTLKVMISIGG-QYSSGEFSGLVSKETSRNLFTNSIVSFVQNYDIDGVD 219

  Fly   149 LDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTR-LLLTMAVPAGIEYIDKGYDVPK 212
            :.|.:|      |..|.:||..|::|||..|....:|..|.. .::::.:...:.::.   ::.:
 Worm   220 IFWTWP------KYSDENNYLMFIRELRYAFTELQKKLNRKETFVISLVISRNVNHLS---NLVE 275

  Fly   213 LNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDK--- 274
            .:.::|:.|:..:   :|....:...:|||.         .....:|.::|||:.......|   
 Worm   276 FSNFVDFLNIYLF---NSFLNQIGPDSPLYG---------GGSRIVDENMKYYICKSGQPSKFNI 328

  Fly   275 LVLGIPTYGRSYTL-INEESTEL-------GAPAEGPGEQGDATREKGY----LAYYEICQTLKD 327
            :|....||.....| :.::|.::       ..|...|..|   .|:..:    :.::.:.:|   
 Worm   329 IVSFHATYWNGAELPLRDDSDDIWKDNNSGRLPIALPRRQ---LRQYNWNLTDIKFHNLTKT--- 387

  Fly   328 DPEWTVVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDD 384
            ...|        :.||    ..:::..::|..:|:|..||....:|||..|.||.||
 Worm   388 SYIW--------IPGP----PTRFMTLEEERSLREKNRYVADHNIGGITMWTIDQDD 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 81/374 (22%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 82/376 (22%)
CBM_14 506..562 CDD:279884
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
chil-6NP_496126.1 Glyco_18 113..431 CDD:214753 81/374 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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