DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and cht-3

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:372 Identity:75/372 - (20%)
Similarity:157/372 - (42%) Gaps:48/372 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQL--KTMIAIGGW 111
            |...|:....|:|:|..:......::|...||.:|:.:    |....::...::  :.::::|. 
 Worm   387 FPIDNLKSDYCSHIVVPYFALDLSDKMIEEDKAEDLVK----KIDDWRSKIVEVAPRLILSVGS- 446

  Fly   112 NEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQEL- 175
            .:||:.:..|:.::..|::..:.::|.:...:.||:::.|   ..:......|:.|...|:.:: 
 Worm   447 KQASTIWQFLLGNDFHRKELAEGLVKAINSTNADGLEISW---TSQPMVSDFDKKNLKSFINDIV 508

  Fly   176 RAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAP 240
            .|:..:..|        :.:|......|.| .||...|||......:.::..||...|...|.:|
 Worm   509 AADTAKMVE--------IVVATSQQSAYSD-FYDYEHLNKTASLIVLHSHRLHSDSLPFTGHPSP 564

  Fly   241 LYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLVLGIPTYGRSYTLINEESTELGAPAEGP-- 303
            |.:....:    :.:::.:..:.::::......||||.:    .:.||..:...::.:.|..|  
 Worm   565 LRATSSMT----NQKMSWESLLSHWVEKRVLPSKLVLSL----SASTLSMQSLADVRSSAATPFG 621

  Fly   304 ---------GEQGDATREKGYLAYYEICQTLKDDPEWTVVQPNANVMGPYAYRRNQWVGYDDEAI 359
                     .::||...::      |||::||.....|.....|.|  ||..|.:|.|.|::...
 Worm   622 QSAFVSMLRSKKGDIHSQQ------EICESLKSGTGVTHWVDGAEV--PYLRRYDQMVAYENTRS 678

  Fly   360 VRKKAEYVVAQGLGGIMFWAIDNDDFRGTC-NGKPYPLIEAAKEAMV 405
            ...||.:...:|:||:....:..||....| |...:|::.|...|.|
 Worm   679 AHIKAVWASMEGVGGLALHNMHQDDPSAVCDNRTAFPILNALSRAQV 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 67/347 (19%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 73/369 (20%)
CBM_14 506..562 CDD:279884
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753
GH18_chitinase-like 51..>103 CDD:299167
Glyco_18 375..702 CDD:214753 67/347 (19%)
GH18_chitinase-like 387..723 CDD:299167 73/368 (20%)
Glyco_hydro_18 761..1043 CDD:279094
GH18_chitinase-like <1018..1062 CDD:299167
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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