DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht6 and chil-21

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_496029.2 Gene:chil-21 / 174502 WormBaseID:WBGene00011164 Length:470 Species:Caenorhabditis elegans


Alignment Length:401 Identity:100/401 - (24%)
Similarity:170/401 - (42%) Gaps:92/401 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVCYY--TNWSVY-RPGTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAK- 91
            |::.||  |..||. |...:|.          ||.|:||...|.|..::        ..|..|| 
 Worm   110 RIIGYYFATQTSVITRDQVSKL----------THAVFAFVNMTSDGHLQ--------IDGDLAKN 156

  Fly    92 -FTGL----KTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDW 151
             ||.|    |....|:|.||:||| |:.|:.|.|:::|.:|::.||.:.:.||:....||:||.|
 Worm   157 RFTNLIEIAKQQTPQVKVMISIGG-NDNSNNFKPVLSSPDRKKLFINSTVSFLQTYDIDGVDLYW 220

  Fly   152 EYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVP---AGIEYIDKGYDVPKL 213
            ::|     ||: .:|.|:||:.:||...:|:     :...::::.:|   .|..| :.|.|:..:
 Worm   221 KWP-----GKT-SKDIYSQFINDLRYSLQRQ-----KRNYIMSIVLPPPDMGANY-EAGIDIENI 273

  Fly   214 NKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYN----------YDAELNIDYSIKYYLKA 268
            ...:|:.|:.|..:....:    :.|.:.:......:|          |    ||.:|.:.|:..
 Worm   274 FDNVDFLNIFTMGYFGPWQ----NDAGMITGAASQLFNGVNGVPGRKTY----NIHHSTERYVCK 330

  Fly   269 GADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGE------QGDATREKGYLAYYEICQTLKD 327
            ....||..:.||.|           |.|....:||..      ..:||.:.|.:....:.:.|..
 Worm   331 TGQSDKYNIAIPFY-----------TMLWKHVKGPVNPPNIEIYRNATFQGGVVGETSMSRKLVQ 384

  Fly   328 DPEWTVVQPNANVMGPYAYRRN----QWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDD---- 384
            :..:....|..|.....|::.|    .::.::....:..|.:||..:.|||:..||:|.||    
 Worm   385 EEGYDFSNPTYNPEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDDDSNN 449

  Fly   385 ------FRGTC 389
                  |.|.|
 Worm   450 LLNLVKFTGYC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 95/383 (25%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 99/400 (25%)
CBM_14 506..562 CDD:279884
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
chil-21NP_496029.2 Glyco_18 110..444 CDD:214753 95/383 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4747
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.