DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht6 and cht-2

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:618 Identity:153/618 - (24%)
Similarity:240/618 - (38%) Gaps:138/618 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RGAAWQTLFLLCALAYC------INEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVY 64
            |...|..||::......      |.:.|...|.|.|.|:|     |...|.......  .||||:
 Worm     2 RFVMWMWLFVVWITVLFGVSNGGILDRSCGRRRVGYITSW-----GKHPFRDDQAEK--LTHLVF 59

  Fly    65 AFGGFTKDNQMKPFDKYQDIEQGGYAK-----FTGLKTYNKQLKTMIAIGGWNEASSRFSPLVAS 124
            ||.....|..:|        .:|..||     ...:.:.:..||.:.|:||| |.|..||.|.|.
 Worm    60 AFFVVDSDGSVK--------LEGDAAKARLEHVKEVASRHPDLKLLYAVGGW-ENSQYFSVLTAD 115

  Fly   125 NERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREG--GKSRDRDNYAQFVQELRAEFEREAEKTG 187
            :.||...|.|.:|.:::..|||:|:|||||.....  |...||.||...::|||.|......:||
 Worm   116 HSRRSILISNFVKVIKEYGFDGVDIDWEYPVTGGAVEGTPADRRNYVNLMRELRNELRDLESETG 180

  Fly   188 RTRLLLTMAVPAGIEYIDKGYDVPKLNKYLDWFNVLTYDFHSSHEPSVN-HHAPLYSLEEDSEYN 251
            :: .|::.|..||...:..|||:.:|.||.|:.||::||:..:...... :..|...|:......
 Worm   181 KS-YLISFAGAAGHWVLKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTGPPAPLQFAMPKK 244

  Fly   252 YDAELNIDYSIKYY---LKAGADRDKLVLGIPTYGRSYTLINE--EST-ELGAPAEGPGEQGDAT 310
            :...:|:..::|.|   :||   .||:.:|:|.|||.:..:.:  :|| ::...|.....:|  |
 Worm   245 FSGRMNVHATMKDYSCQIKA---TDKINMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEG--T 304

  Fly   311 REKGYLAYYEICQTLKDDPEW---------TVVQPNANVMGPYAYRRNQ--WVGYDDEAIVRKKA 364
            :.:|            .|.:|         |..:.::....|:.:...|  :|||::...::.|.
 Worm   305 KFEG------------GDVQWRDLHEKFDTTKTKFHSGSKTPFIWLSEQKTFVGYENAESLKHKV 357

  Fly   365 EYVVAQGLGGIMFWAIDNDDFRGTCNGKPYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRS 429
            :|:|...:||:|.||||.||.:||.      |..||.|::........|....|...:   |..:
 Worm   358 DYIVENNIGGVMIWAIDFDDDQGTL------LNSAAAESICTTSTKSFNYKCSPVDDK---RWWT 413

  Fly   430 RDNASNRNRLNGKTEAPLSSRRP---------------------------------SATRRPAVS 461
            .|:......:.||:...:....|                                 .|.....:.
 Worm   414 YDDNEELAGMCGKSSPLIDGYYPVCDPDDPGHACCGKYGYCGSGAEFCSCPECIDYGADPNLILK 478

  Fly   462 STQAPPPSTTFKLTEA-EGSSLYIGGRASTTPPP-----PT-TPDPGSDFKCEEEGF-------- 511
            ....|....|:..::| ||..    ||.....||     || .||..:...|...|:        
 Worm   479 EPVKPSQKITWYTSDAGEGKR----GRCGRDVPPLEGEAPTCNPDDANAHCCSNGGYCGNSKEHC 539

  Fly   512 -------FQHPRDCKKY----YWCLDSGPSGLG 533
                   |...||. ||    :|.....|:.:|
 Worm   540 ECNGCIDFAKQRDF-KYKPLEWWTFSENPANVG 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 108/376 (29%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 115/396 (29%)
CBM_14 506..562 CDD:279884 10/47 (21%)
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 108/376 (29%)
GH18_chitinase-like 35..376 CDD:299167 107/374 (29%)
ChtBD1_GH18_2 418..469 CDD:211315 3/50 (6%)
ChtBD1_GH18_2 496..547 CDD:211315 12/54 (22%)
ChtBD1_GH18_2 567..618 CDD:211315 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4747
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.