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Protein Alignment Cht6 and Chil3

DIOPT Version :9

Sequence 1:	NP_001245598.1	Gene:	Cht6 / 31935	FlyBaseID:	FBgn0263132	Length:	4611	Species:	Drosophila melanogaster
Sequence 2:	NP_034022.2	Gene:	Chil3 / 12655	MGIID:	1330860	Length:	398	Species:	Mus musculus

Alignment Length:	395	Identity:	152/395 - (38%)
Similarity:	229/395 - (57%)	Gaps:	20/395 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 LFLLCALAYCIN-EASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFTKDNQMK 76
            |.|:..||..:| :..|..:::||||:|:..||....|.|.||:|.|||||:|||.|. ::|::
Mouse     4 LILVTGLAILLNVQLGSSYQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGM-QNNEI- 66

  Fly    77 PFDKYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQ 141
            .:...||:..  |....|||..|.:|||::|||||....:.||.:|::.:.||.||:::::||||
Mouse    67 TYTHEQDLRD--YEALNGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQ 129

  Fly   142 NHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDK 206
            .:|||::|||:||..| |...:|:..::..|:|:|..||.|:.:....|||||......|:.|..
Mouse   130 YNFDGLNLDWQYPGSR-GSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDVIKS 193

  Fly   207 GYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNY--DAELNIDYSIKYYLKAG 269
            ||.:|:|::.||:..|:|||.|...:.....::|||.    |.|:.  .|:||:|..|.|:...|
Mouse   194 GYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYK----SPYDIGKSADLNVDSIISYWKDHG 254

  Fly   270 ADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPE--WT 332
            |..:||::|.|.||.::.|.:...|.:|||....|..|..|.|.|.|||||:|..|.:...  |.
Mouse   255 AASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEVWD 319

  Fly   333 VVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGT-CNGKPYPL 396
            ..|.     .||||:.|:|||||:....:.||:::....|||.:.|.:|.|||.|: |:.:.:||
Mouse   320 APQE-----VPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPL 379

  Fly   397 IEAAK 401
            ....|
Mouse   380 TSTLK 384

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.