DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and CHIT1

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_003456.1 Gene:CHIT1 / 1118 HGNCID:1936 Length:466 Species:Homo sapiens


Alignment Length:564 Identity:196/564 - (34%)
Similarity:287/564 - (50%) Gaps:118/564 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RGAAWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFT 70
            |..||....:|..:.:     .|..::|||:|||:.||.|.|:|.|::::|.|||||:|||.|.|
Human     3 RSVAWAGFMVLLMIPW-----GSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMT 62

  Fly    71 KDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNI 135
              |......::.|  :..|.:|.|||..|.:|||::||||||..:.:|:.:||:...||.|:.:.
Human    63 --NHQLSTTEWND--ETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSA 123

  Fly   136 LKFLRQNHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAG 200
            ::|||:..|||:|||||||. .:|..:.|::.:...||:|...|::||:.:|:.||||:.|||||
Human   124 IRFLRKYSFDGLDLDWEYPG-SQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAG 187

  Fly   201 IEYIDKGYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYY 265
            ..|:|.||:|.|:.:.||:.|::.||||.|.|....|::|||..:|:|  ...|.||:|.:::.:
Human   188 QTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEES--GAAASLNVDAAVQQW 250

  Fly   266 LKAGADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEIC-------Q 323
            |:.|....||:||:||||||:||.:...|.:||||.|.|..|..|:|.|.|||||:|       |
Human   251 LQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQ 315

  Fly   324 TLKDDPEWTVVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRG- 387
            .::|...            ||.:|.|||||:||....:.|..|:..:||||.|.||:|.|||.| 
Human   316 RIQDQKV------------PYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGF 368

  Fly   388 TCNGKPYPLIEAAK-EAMVEALGLGIN--EVAKPSGPQKPSRSRSRDNASNRNRLNGKTEAPLSS 449
            :||...||||:..: |..:..|..|..  ||.||..|.:|...                      
Human   369 SCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHG---------------------- 411

  Fly   450 RRPSATRRPAVSSTQAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFKCE--EEGFF 512
                                                            |.||.|..|:  .:|.:
Human   412 ------------------------------------------------PSPGQDTFCQGKADGLY 428

  Fly   513 QHPRDCKKYYWCLDSGPSGLGIVAHMF--TCPSGLYFNPAADSC 554
            .:||:...:|.|         ....:|  :||:||.|:.:...|
Human   429 PNPRERSSFYSC---------AAGRLFQQSCPTGLVFSNSCKCC 463

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 155/358 (43%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 166/380 (44%)
CBM_14 506..562 CDD:279884 13/53 (25%)
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
CHIT1NP_003456.1 Glyco_18 23..363 CDD:214753 155/358 (43%)
GH18_chitolectin_chitotriosidase 24..385 CDD:119351 165/379 (44%)