back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Cht6 and Chil4

DIOPT Version :9

Sequence 1:	NP_001245598.1	Gene:	Cht6 / 31935	FlyBaseID:	FBgn0263132	Length:	4611	Species:	Drosophila melanogaster
Sequence 2:	NP_660108.2	Gene:	Chil4 / 104183	MGIID:	1341098	Length:	402	Species:	Mus musculus

Alignment Length:	393	Identity:	152/393 - (38%)
Similarity:	225/393 - (57%)	Gaps:	16/393 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 LFLLCALAYCIN-EASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFTKDNQMK 76
            |.|:..||..:| :..|..:::||||:|:..||....|.|.||:|.|||||:|||.|. |:|::.
Mouse     4 LILVTGLAILLNVQLGSSYQLMCYYTSWAKDRPTEGSFKPGNIDPCLCTHLIYAFAGM-KNNEIT 67

  Fly    77 PFDKYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQ 141
            ...: ||:..  |....|||..|.:|||::|||||....:.||.:|::.:.||.|||::::||||
Mouse    68 YLSE-QDLRD--YEALNGLKDRNTELKTLLAIGGWKFGPAPFSSMVSTPQNRQTFIKSVIRFLRQ 129

  Fly   142 NHFDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDK 206
            .:|||::|||:||..| |...:|:..::..|||:|..||.|:......|||||......|:.|..
Mouse   130 YNFDGLNLDWQYPGSR-GSPPKDKHLFSVLVQEMRKAFEEESTLNHIPRLLLTSTGAGFIDVIKS 193

  Fly   207 GYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNY--DAELNIDYSIKYYLKAG 269
            ||.:|:|::.||:..|:|||.|.........::|||.    |.|:.  .|:||:|..|.|:...|
Mouse   194 GYKIPELSQSLDYIQVMTYDLHDPKNGYTGENSPLYK----SPYDIGKSADLNVDSIITYWKDHG 254

  Fly   270 ADRDKLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVV 334
            |..:||::|.|.||.::.|.:.....:|.|....|..|..|.|:|.|||:||| |..::....:.
Mouse   255 AASEKLIVGFPAYGHTFILSDPSKNGIGDPTVSAGPPGKYTNEQGLLAYFEIC-TFLNEGATEIF 318

  Fly   335 QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGT-CNGKPYPLIE 398
            .....|  ||||..|:|||||:....:.||:::....|||.:.|.:|.|||.|: |:...:||..
Mouse   319 DATQEV--PYAYLGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQGRFPLTT 381

  Fly   399 AAK 401
            ..|
Mouse   382 TLK 384

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.