DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht6 and si:ch211-226m16.2

DIOPT Version :9

Sequence 1:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster
Sequence 2:NP_001191302.1 Gene:si:ch211-226m16.2 / 100003708 ZFINID:ZDB-GENE-030131-2302 Length:410 Species:Danio rerio


Alignment Length:405 Identity:84/405 - (20%)
Similarity:153/405 - (37%) Gaps:99/405 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FLLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPF 78
            |....|...:....::.|:.||.   .|..|.|.:.:        |||::  ....:.|:::   
Zfish     7 FAFLCLVVSVGAQRTQSRLSCYL---DVLTPHTREGS--------CTHII--LPSVSSDDEL--- 55

  Fly    79 DKYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNH 143
             ..|.:.:..|.....:|..|..||.::   |....|||...:.|:......||:.:|.:|::..
Zfish    56 -YLQSLTENEYDAIQRMKERNSALKILL---GLEIKSSRLKLMSANEASVGSFIQTLLTYLKEKR 116

  Fly   144 FDGIDLDWEYPAHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGY 208
            .||:|:.|      ..|...|.:.:..|::.::..||.|...     |||:.:|....:.....|
Zfish   117 LDGLDVIW------LDGTPSDTELFTDFLKSIKGVFEEEMRP-----LLLSASVKEPTDKTVASY 170

  Fly   209 DVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRD 273
            |...|::|:|:.::|         |:        .|:.|.:|       |..:.:::.....|..
Zfish   171 DEQILSQYVDFISIL---------PA--------QLQTDGQY-------ISKTAQHWQDKQVDLQ 211

  Fly   274 KLVLGIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKG----------YLAYYEICQTLKDD 328
            ||.|.:|.:       .:.|.........| :..|.|.|:|          ||. .::||.:|..
Zfish   212 KLGLVMPGF-------LQRSRHRHHHRNHP-KHDDTTAEEGKKDHVHLLNLYLG-DQVCQAVKSG 267

  Fly   329 PEWTVVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDF-RGTCNGK 392
            ....:...:.:               |:::.:::    |:.||.|||....||.|.| ...|   
Zfish   268 QLQFITLTSVS---------------DEQSPIKE----VLQQGFGGIGVVLIDLDVFGNSMC--- 310

  Fly   393 PYPLIEAAKEAMVEA 407
              |.:...:.|.||:
Zfish   311 --PNMTQKERATVES 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht6NP_001245598.1 Glyco_18 31..383 CDD:214753 75/361 (21%)
GH18_chitolectin_chitotriosidase 32..404 CDD:119351 78/382 (20%)
CBM_14 506..562 CDD:279884
Oxidored_q2 <2691..2750 CDD:294335
CBM_14 4554..4609 CDD:279884
si:ch211-226m16.2NP_001191302.1 GH18_chitinase-like 41..>185 CDD:324582 38/163 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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