DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and emb2411

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_001322072.1 Gene:emb2411 / 837406 AraportID:AT1G08840 Length:1331 Species:Arabidopsis thaliana


Alignment Length:1132 Identity:322/1132 - (28%)
Similarity:532/1132 - (46%) Gaps:186/1132 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QKKFKEQLDFSSDEVENIDWGDNDDFDLALIAA--MDSISNHRLELTKWQRCEV----VRLEQLP 83
            :|...|.|| ..::|..:|....||..:.:..|  .|.|.:..::      |.|    |.|.::.
plant   262 KKALLELLD-QVEDVIAVDDKTTDDVGIVMPQARVKDDIISSVVD------CAVDEGPVSLPKMQ 319

  Fly    84 NRKG-------LKVHVKRISGG--------------DPET-ADCQLL--PPWNCMPMQVGDTVSL 124
            |...       |:|..||.||.              |..| .:|.|.  ..|....:..||::::
plant   320 NSINPDSYFLVLEVSEKRGSGSSSKGQCPYKVLRLLDEHTGVECALYLWDEWFYSTVSPGDSINV 384

  Fly   125 LGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQERFRGLDSGNSVMVIGTLV 189
            :|::|....| .||::..:.:.|||.|::||.|..|..|.|::||.||.|..:.. :|.::|||.
plant   385 IGEFDGDGKC-DVDRQNNFLIVHPDTLVAGTRVAASFGCPRRTVLDERLRSNEHA-TVALLGTLQ 447

  Fly   190 HELLQKVLRQKLFDKKHIQSALQEMLASSSLAHLLYASNLIQVEMEDHLMKFIDPIVSFVAQYVK 254
            |::.|..|.|:......:|.....::..|  ...|||..:.:.::...|.|.|..:::::..:..
plant   448 HQVFQAGLSQESPSVDGLQEYASTVIEKS--IESLYACGVHEGDVRSTLFKAIPKMLNWIEHFRY 510

  Fly   255 GEPPSVLLPEVYRG--------QIHEICDIEENLWVPQLGLKGKVDVSVKVKNQRQ----REEII 307
            .:...|  .:|..|        ::.|:.||||..|.|:.||||.:|.||:|..:..    .|:|:
plant   511 SKDSEV--SKVDFGSTIGKKAVKVSEVIDIEEMSWAPKYGLKGMIDASVRVIVESDMNTVNEKIM 573

  Fly   308 PLELKTGRA---SFSMEHKGQLLLYQLMHSAQG-RDTQSGLLLYLKEGLLREVASGRNEQRDLLM 368
            |||.|:|:|   ..|:||..|::||.|:.|.:. :...:|||.||:....:.::..|::...|::
plant   574 PLEFKSGKAPSGQSSIEHSAQVILYTLLMSERYLKHIDNGLLYYLQSDQTQGISVQRSDLVGLII 638

  Fly   369 LRNDLAYWLTREVAIPASKEDPLEQLPLPEPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPL 433
            .||:||    .::.:.::.:.      ||..:.:.:.|.||.:..:|:.:.:.|..  .::|..|
plant   639 RRNELA----NDILVASTTQQ------LPPMLRNPNICRNCRHLDVCTIYHKADGG--NTESSGL 691

  Fly   434 KKLMPQLLEHLSEADHAYVQHWCGLLALE------------EQHNRQSSHVRSF----------- 475
            ..:....:.|||.....:::||..|:.||            ..|..:.||..|:           
plant   692 GDVFDTHVSHLSTLHFNFLRHWDRLIDLEGREMQLLRKDIAHPHGSKGSHSASYLSSMVLDVTNG 756

  Fly   476 WTKDPAEREKEGIAIRHLKLVKGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDL------GEY 534
            :....:.:|...|    .:.|:.:.   .|.|.|.|.|     |..|..:|:..||      |:.
plant   757 FQHHNSHKETRFI----YRFVRQKS---SESRERVTSE-----DMIRTGNLATDDLDCKLRTGDR 809

  Fly   535 VVI-SSTSRLAVAAGFIVSIEARRLDLRLERDLSQRYSE----------ETFIIDKHD-SQSFAT 587
            |:: :..|.|.||.|.|..|....:.:.|.:.|...:||          |.:.|.|.: ..||:.
plant   810 VILRTEVSHLTVANGIIADISRTHISVSLSKRLRLPWSEPSSEVSNLSHELWRIYKDEFMTSFSV 874

  Fly   588 FNFTNLGMLLSEGERFQELRDIIVAKKPP--------EQHKVLPKIILTKGAPILLNLNKVQQNA 644
            ..|..:.:.:..|   ..:|.:||..:||        .|...:..|...|      :||..|:.|
plant   875 MRFNLMQLFVQNG---HNIRKMIVDLEPPRFDNGSILSQDPAISYIWSEK------SLNNDQRQA 930

  Fly   645 ALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPFGLPMMR 709
            .|:.||...:.||.|:||||||.|:|..|:.|.:.|.|:|:.:.|:||||||:::|...|:..:|
plant   931 ILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSILLASYTNSAVDNLLIKLKAQGIEFLR 995

  Fly   710 LGSGSRIHKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEAT 774
            :|....:|:::.|.....:.. | :||:::|.|.|..:|..||||...||...|:||.||:|||.
plant   996 IGRDEAVHEEVRESCFSAMNM-C-SVEDIKKKLDQVKVVASTCLGINSPLLVNRRFDVCIIDEAG 1058

  Fly   775 QVLQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDS--EKATAVLSLQYRM 837
            |:..|..:.||:..|.||||||..||||:|:|.|||:.|...:||:||..  .:|.:||..||||
plant  1059 QIALPVSIGPLLFASTFVLVGDHYQLPPLVQSTEARENGMGISLFRRLSEAHPQAISVLQNQYRM 1123

  Fly   838 NKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLINTGDCLERC 902
            .:.|..|:|.|.||..|.|.|.||:.|...:...:....|:::.|..  .:.|..:||       
plant  1124 CRGIMELSNALIYGDRLCCGSAEVADATLVLSTSSSTSPWLKKVLEP--TRTVVFVNT------- 1179

  Fly   903 QEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHLLRYLLKSGYEASR 967
                       |...:.|   :.|::.|            .|..||.|:..::..|:.:|.::..
plant  1180 -----------DMLRAFE---ARDQNAI------------NNPVEASIIAEIVEELVNNGVDSKD 1218

  Fly   968 IGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILE 1032
            ||:|.||.:|..|.:....  .|.:|.:|:|::|||||:.|:.|..::    .:..||..:.:|.
plant  1219 IGIITPYNSQASLIQHAIP--TTPVEIHTIDKYQGRDKDCILVSFVRS----REKPRSSASSLLG 1277

  Fly  1033 DQRRLTVAITRAKNKLILLGDIKCLEQ 1059
            |..|:.||:||||.|||::|..:.|.:
plant  1278 DWHRINVALTRAKKKLIMVGSQRTLSR 1304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859 60/208 (29%)
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 41/139 (29%)
TIGR00376 480..1069 CDD:273041 191/608 (31%)
P-loop_NTPase 636..859 CDD:304359 97/224 (43%)
AAA_12 815..1055 CDD:289832 71/241 (29%)
emb2411NP_001322072.1 Dna2 356..559 CDD:370071 60/208 (29%)
Cas4_I-A_I-B_I-C_I-D_II-B 506..676 CDD:382125 50/181 (28%)
TIGR00376 801..1317 CDD:273041 178/556 (32%)
DEXXQc_DNA2 922..1122 CDD:350799 86/201 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I2533
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6124
Inparanoid 1 1.050 374 1.000 Inparanoid score I555
OMA 1 1.010 - - QHG56923
OrthoDB 1 1.010 - - D633768at2759
OrthoFinder 1 1.000 - - FOG0002978
OrthoInspector 1 1.000 - - oto3719
orthoMCL 1 0.900 - - OOG6_102643
Panther 1 1.100 - - LDO PTHR10887
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1978
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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