DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and CG6967

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_611185.3 Gene:CG6967 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster


Alignment Length:626 Identity:141/626 - (22%)
Similarity:240/626 - (38%) Gaps:177/626 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 ISSTS--------RLAVAAG--FIVSIEARRLDLRL---------ERDLSQRY-----SEETFII 577
            :|||:        ..||.:|  |...|.:|||.:|.         |..|.:||     |..|.::
  Fly   147 VSSTTVHVRFSRKHKAVLSGQRFYAIIRSRRLTIRYMYRALNLLQESPLVRRYLFPFPSWLTQLV 211

  Fly   578 DKHDSQSFATFNFTNLGMLLSEGERFQELRDIIVAKKPPEQHKVLPKIILTKGAPILLN---LNK 639
            |....:.....:..|.                 :..:|  |....|..:....:.|..|   |..
  Fly   212 DNSQIKVCCDGHLPNW-----------------MQGRP--QEPATPTSLSLLNSTIYSNAEQLEA 257

  Fly   640 VQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLL--GKSVLITAQTHSAVDNLIMRLLP 702
            ||:..|  ..:|....::.|.||||||.|:|..:..|.|.  ...:|:||.::||.|.:.::|..
  Fly   258 VQRIVA--GPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIALKLCE 320

  Fly   703 FGLPMMRLGSGSRIHKQLEEISEERLTK-DCKTVEELEKALGQPSIVGVTCL-----GCGHPLFQ 761
            :      :.|..|:.   |..::::|.: |.:.:....:::.:.....|..|     .|...::.
  Fly   321 Y------IESNIRLQ---EHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYD 376

  Fly   762 RRQ------------------------------FDYCIVDEATQVLQPTVLRPLIHCSK-----F 791
            ..:                              |.:..:|||....:|..|..::...:     .
  Fly   377 HIKASRIVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHV 441

  Fly   792 VLVGDPEQLPPIVRSKEARQRGADETLFQRL---DSEKA----------TAVLSLQYRMNKTITR 843
            :|.||.:||..:::|..|...|...:|.:||   |..|:          ...|...||.:..|.|
  Fly   442 ILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVR 506

  Fly   844 LANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLINTGDCLERCQEFVYA 908
            |.|||.|.|:||..:..:.        :|.|..|   ::.|:.:..:....|.....|       
  Fly   507 LFNELYYNGELKAQAPAMD--------VNLAANW---SVLTNPQFPIIFQATHGVTNR------- 553

  Fly   909 SQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHLLRYLLKS---GYEASRIGV 970
                       ||:               ..|.|.| .||.::...::.|:..   |.|  .:|:
  Fly   554 -----------EQN---------------STSSYNN-LEAEVICWYVKRLINDRVVGQE--DVGI 589

  Fly   971 IAPYRAQVELFKK-LASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQ 1034
            :|||.||.:|..| |.||...::|..:|:.:|||:|.:||.|..|:   |::|      ..:.:.
  Fly   590 VAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQGREKTIIIASLVKS---FTNM------GFMCNP 645

  Fly  1035 RRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHIPDRCR 1075
            ||:.|.::|||..|||:|:...|..:..    ||.:.:.|:
  Fly   646 RRVNVLLSRAKALLILVGNPVTLRHHSD----FKFVINECK 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426
TIGR00376 480..1069 CDD:273041 139/618 (22%)
P-loop_NTPase 636..859 CDD:304359 64/281 (23%)
AAA_12 815..1055 CDD:289832 67/256 (26%)
CG6967NP_611185.3 AAA_11 251..456 CDD:289831 43/215 (20%)
AAA_19 256..323 CDD:289986 22/74 (30%)
UvrD_C_2 464..665 CDD:304668 67/256 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438974
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10887
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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