DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and CG6701

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_001188923.1 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster


Alignment Length:1209 Identity:237/1209 - (19%)
Similarity:437/1209 - (36%) Gaps:384/1209 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 DLALIAAMDSISNHRLELTKWQRCEVVRLEQLPNRKGLKVHVKRISGGDPETADCQLLPPWNCMP 115
            ::|.:..:.:.:...::..|.::...|.|..|||..  ::..|..|.|                .
  Fly    63 EMARLQVISAQTEWYVDKAKMRKLFEVHLNALPNSS--EIRQKLSSQG----------------A 109

  Fly   116 MQVGDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVL---QERFRGLD 177
            ..:|   |||.:.:     ::::..:|    :|::.|...::..  |.|.|..|   |.|.||:.
  Fly   110 TNIG---SLLHRTN-----FLINTPRG----NPNYRIKNFSLMD--FRKEKFNLLDEQHRLRGIA 160

  Fly   178 S-----------GNSVMV----IGTLVHELLQKVLRQKLFDKKHIQSALQEMLASSSLAHLLYAS 227
            |           ||..::    :.|.|...|.|..::.|     :||  .:.....||...:...
  Fly   161 STTDVPGGAPAEGNKPIIEEYKLDTDVKPTLLKFQKRLL-----LQS--DKDFELQSLGCYICQE 218

  Fly   228 NLIQVE-MEDH---------------LMKFIDPIVSFVAQYVKGEPPSVLLPEVYRGQIHEICDI 276
            |..::| .|:|               :.|:..||||.                     .::.|  
  Fly   219 NFEKIEKYEEHVEYHGDESDFQSLKKMKKYPTPIVSL---------------------SYQTC-- 260

  Fly   277 EENLWVPQLGLKGKVDVSVKVKNQRQREEIIPLELKTGRASFSMEHKGQLLLYQLMHSAQGRDTQ 341
                          ||           .......|||.|....::   :.::.||..        
  Fly   261 --------------VD-----------SHYFGFTLKTFRKDLVVD---KFIIVQLRQ-------- 289

  Fly   342 SGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAYWLTRE----VAIPASKEDPLEQLPLPEPVYH 402
               ..|:....:....:|..|   |:...:...:.:.||    :......|..:||        |
  Fly   290 ---FYYVYGAQMPLPVNGSGE---LVFFVDSHVFMILREQPIVIGFTIQGEKYVEQ--------H 340

  Fly   403 H----SACGNCAYNTICSSFAQKDS--SLQLSDSHPLKKLMPQLLEH------LSEADHAYVQHW 455
            |    .|....::|......:.|::  |..|..::|..::: ..|:|      |:..|:.| |::
  Fly   341 HFMRTEALPKASFNINPYRLSSKETFKSKGLPPANPPIQVL-SALKHEDAQMCLASFDNQY-QNY 403

  Fly   456 CGLLALEEQHNRQSSHVRSFWTKDPAEREKEGIAIRHLKL----------VKGQ--------EVI 502
            |.......|.|...: :|:....:..||.:..::::..::          ||.|        |.|
  Fly   404 CERGREITQENLTGT-LRTLLQVEDIERLQHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVEDI 467

  Fly   503 LEEGRYRQTLELGEEADPSR-------------DLSLSGFDL---------GEYVVISSTSRLAV 545
            |..|  ...|.:.|:.:|..             :|:|..||.         |....:....|:..
  Fly   468 LSPG--DDVLIINEKGNPKSAVRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVYF 530

  Fly   546 AAGFIVSIEARRLDLRLERDLSQRYSEETFI------IDKHDSQSFATFNFTNLGMLLSEGERFQ 604
            |.  |:.:..:|:::..||.|... :..|.|      :.::..::....:||          |..
  Fly   531 AR--ILGVSTQRVNITCERQLPDN-TTYTLIFRPLRAVMRYQYRALQQLSFT----------RHS 582

  Fly   605 ELRDIIVAKKPPEQHKVLPKIILTKGAPILLNLNKV-----QQNAALRALTTSSHL----LIKGL 660
            :::.|:.   |.|    :|...|..|. :.|| ||:     :|..|:|.:..|..|    ::.|.
  Fly   583 DVQRILF---PGE----IPNTPLASGV-LQLN-NKLISTNPEQMQAVRQIALSPRLKAPYIVFGP 638

  Fly   661 PGTGKTQTLVALVRLLHLLGKS--VLITAQTHSAVDNLIMRLL----------PFGLPMMRLGSG 713
            ||||||.|:|..:..|::....  :|:.|.:::|.|.:.:|||          |  .|:.|:.| 
  Fly   639 PGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQP--RPLTRIFS- 700

  Fly   714 SRIHKQLEEISEERLTKD----------CKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYC 768
            :...::::.|.:..|...          .:.|.:....:...|:.|....|   .......:.:.
  Fly   701 ANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKLSTG---GFAANNVYTHV 762

  Fly   769 IVDEATQVLQPTVLRPLIHCS-----KFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKAT 828
            .||||....:..||.. |.|:     ..:|.||.:||.|:::|:.|.:.|...|||:||...|..
  Fly   763 FVDEAAASTEAEVLMG-ITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCY 826

  Fly   829 AV-------------LSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQR 880
            .|             |...:|.:..|..|.|.:.|.|.|:..:        .:|::.....|.  
  Fly   827 QVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEA--------PMEIVCRFHNWF-- 881

  Fly   881 ALTTHLEQAV----------TLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTS 935
                :|..|.          |.:||...:..|                                 
  Fly   882 ----YLPNATFPIMFHSVFGTTMNTKSSVSLC--------------------------------- 909

  Fly   936 KKRVSKYTNYCEAGIVMHLLRYLLKSGYEASR-----IGVIAPYRAQVELFKKLASKLD----TD 991
                    |..|..:||..::.|:..|....:     ||:|:||:.|   ::::..:|:    :.
  Fly   910 --------NNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQ---YQRIQEQLNMRNWSQ 963

  Fly   992 LECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKC 1056
            ::|.:|:.|||::|::||.|..::   |:.     :...|.::|||.|.::|..:.|||:|:.:.
  Fly   964 IDCGSVELFQGKEKHVIIVSFVRS---FTP-----KLGFLNNERRLNVLLSRPISLLILIGNPRT 1020

  Fly  1057 LEQYGPFRQLFKHIPDRCRLKLEEGRMEFGWQRIQEDLV 1095
            |.|...    |:||.:.||.:    :...|.|.:.||.:
  Fly  1021 LSQNSD----FQHIIEMCRNR----KTLVGEQYLNEDFI 1051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859 39/231 (17%)
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 21/139 (15%)
TIGR00376 480..1069 CDD:273041 147/702 (21%)
P-loop_NTPase 636..859 CDD:304359 67/271 (25%)
AAA_12 815..1055 CDD:289832 56/271 (21%)
CG6701NP_001188923.1 TIGR00376 424..1037 CDD:273041 151/713 (21%)
AAA_19 618..687 CDD:289986 21/68 (31%)
AAA_12 812..1019 CDD:289832 56/272 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438975
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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