Sequence 1: | NP_727386.1 | Gene: | CG2990 / 31934 | FlyBaseID: | FBgn0030170 | Length: | 1100 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
Alignment Length: | 844 | Identity: | 204/844 - (24%) |
---|---|---|---|
Similarity: | 349/844 - (41%) | Gaps: | 237/844 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 352 LLREVASGRNEQRDL---------LMLRNDLAYWLTREVA---------IPASKEDPLEQLPLPE 398
Fly 399 PVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYVQHWCGLLALEE 463
Fly 464 QHNRQSSHVRSFWTKDPAERE-----------KEGIAI-------RHLKLVKGQEVILEEGRYRQ 510
Fly 511 TLELGEEADPSRDL-------SLSGFDLGEYVVISSTSRLAVAAGFIVSI--EARRLDLRLERDL 566
Fly 567 SQRYSEETFIIDKHDSQSFATFNFTNLGMLLSEGERFQELRDIIVAKKPPEQHKVLPKIILTKGA 631
Fly 632 PILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALV-RLLHLLGKSVLITAQTHSAVDN 695
Fly 696 LIMRLLPFGLPMMRLGSGSR-----------IH------------KQLEEISEER---LTKDCKT 734
Fly 735 VEELEKA-----LGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQVLQPTVLRPLIHCSK-FVL 793
Fly 794 VGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAVLSL-------QYRMNKTITRLANELTYG 851
Fly 852 GDLK---CASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLINTGDCLERCQEFVYASQRLV 913
Fly 914 DTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHLLRYLLKSGYEASRIGVIAPYRAQ- 977
Fly 978 ------VELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAE---ILED 1033
Fly 1034 QRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHIPD--RCRLKLEEGRMEFGWQRIQEDLV 1095 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG2990 | NP_727386.1 | Dna2 | 99..297 | CDD:285859 | |
Cas4_I-A_I-B_I-C_I-D_II-B | <283..415 | CDD:294426 | 12/80 (15%) | ||
TIGR00376 | 480..1069 | CDD:273041 | 172/668 (26%) | ||
P-loop_NTPase | 636..859 | CDD:304359 | 78/265 (29%) | ||
AAA_12 | 815..1055 | CDD:289832 | 68/259 (26%) | ||
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | 12/78 (15%) |
DNA2 | 122..897 | CDD:224037 | 204/844 (24%) | ||
Mis12 | 210..299 | CDD:283509 | 19/119 (16%) | ||
AAA_19 | 458..>515 | CDD:289986 | 24/57 (42%) | ||
AAA_12 | 661..857 | CDD:289832 | 68/260 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45438984 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10887 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |