DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2990 and Mov10l1

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:XP_017450774.2 Gene:Mov10l1 / 300141 RGDID:1304735 Length:1291 Species:Rattus norvegicus


Alignment Length:1201 Identity:253/1201 - (21%)
Similarity:391/1201 - (32%) Gaps:446/1201 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 GTLVHELLQ-KVLRQKLFDKKHIQSALQEMLASSSLAHLLYASNLIQVEMEDHLMKFIDPIVSFV 249
            ||...|.:. |.||.|..||..|.|              |...|.:   :||.:...:|      
  Rat   167 GTWSSEAISVKPLRYKRVDKVCISS--------------LCGRNGV---IEDSIFFSLD------ 208

  Fly   250 AQYVKGEPPSVLLPEVYRGQIHEICD---IEEN----LW----------------VPQ-----LG 286
                     |:.|||.|..:.|:|.:   :|.:    :|                .||     |.
  Rat   209 ---------SLKLPEGYTPRRHDIVNAVVVESSQSCYIWRALCMTPVKREAIIGEAPQEPYGALL 264

  Fly   287 LKGKVDVSV-------KVKNQRQREEIIPLELKTGRAS---FSMEHKGQLLLYQLMHSAQGR-DT 340
            ||.|.||.|       .:|....:..:|.:|.| |..|   .|....|....:|....|||| ..
  Rat   265 LKNKGDVEVTRTTSFGTLKEGESKAVVIWIENK-GEISQDLVSCRLAGWDKAHQFRFEAQGRGQA 328

  Fly   341 QSGL-LLYLKEGLLREVASGRNEQRD-------LLMLRND--------LAYWLTREVAIPASKED 389
            .:|: .:.:.||   |..:..|..|:       ...|.|:        .....:||....|.|::
  Rat   329 CAGVAAVAVSEG---ENVNSLNHHREDKPDPIPESSLENNTEISPDGCACTEESREKGDTAEKQE 390

  Fly   390 PLE--QLPLPEPVYHHSAC-----GNC-------------------------------------- 409
            |..  .:|..|.......|     |.|                                      
  Rat   391 PEPGGLIPPGEKTSIVVTCNAKNPGRCKELLLLCFSNFLIGRHLEVNVVSSEEALIAVREPFSWK 455

  Fly   410 ----------AYNTICSSFAQKDSSLQLSDSHP-------LKK----------LMPQLLEHLSEA 447
                      |..|:..:..:::|..||....|       |||          ..|.|.|.|:.:
  Rat   456 KPKSSQTIVSAKTTVVVTTQKRNSRRQLPSFLPQYPIPDRLKKCVEQKIDILTFQPLLAELLNMS 520

  Fly   448 DHAYVQHWCGLLALEEQH---NRQSSHVRSFWTKDPAE---REKEGIAIRHLKLVKGQEVILEEG 506
            :  |.:.:..||.|||.|   ..:..::.....|...|   .|..|:|.....|..|.::||:..
  Rat   521 N--YKEKFSTLLWLEEIHAEIELKEYNMSGVVLKRKGELLVLEVPGLAESRPSLYAGDKLILKSQ 583

  Fly   507 RYR--------QTLELGEEADPSRDLSLS---GFDL--------GEYVVISSTSR---------- 542
            .|.        ..:|:.||     |::|.   ||:.        .|:....:|||          
  Rat   584 EYNGHVIEYIGYVMEIHEE-----DVTLKLNPGFEQMYNFEPMDVEFTYNRTTSRRCHYALEQVI 643

  Fly   543 -LAVAAGFIVSI-------------------------EARRLDLRLERDLSQRYSEETFIIDKHD 581
             |.|...|...|                         :..|.|.:...::::...:....|.|:|
  Rat   644 HLGVKVLFPEEIILQSPQVTGNWSLAQDTKSDGQSITKVTRNDGQSITNITKNDGQSITNITKND 708

  Fly   582 SQSFATF------NFTNL---------------GMLLSEGER--FQELRDII------VAKKPPE 617
            .||....      :.||:               |..:::..|  .|.:.:|.      :.|....
  Rat   709 GQSITKVTKNDGQSITNITKNDGQSITSITKNGGQSINKVTRNDGQSITNITRNDGQSITKVTKN 773

  Fly   618 QHKVLPKIILTKGAPILLN---------------------------------------------- 636
            ..:.:.|:....|..|..|                                              
  Rat   774 GGQSISKVTRNDGQSITKNKKTVKDQTKNTTKERHLSTTDQPEKTASTAETMDEIQIPRARDKEF 838

  Fly   637 ----LNKVQQNAALRALTTSSH---LLIKGLPGTGKTQTLVALVRLLH--LLGKSVLITAQTHSA 692
                ||:.|:.|..|.|:....   .::.|.||||||.|::..|..:|  |....:|:.|.::||
  Rat   839 FNPVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNSA 903

  Fly   693 VDNLIMRLLPFGL----PMMRLGSGSRIHKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCL 753
            .|.:.:||....:    .|:|:.:..|    .||...|.:...|:..|::.:| .:..|:..||.
  Rat   904 ADLVCLRLHESKVLKPAAMVRVNATCR----FEETIIEAIKPYCRDGEDIWRA-SRFRIIITTCS 963

  Fly   754 GCGHPLFQR-----RQFDYCIVDEATQVLQPTVLRPLIHCS----KFVLVGDPEQLPPIVRSKEA 809
            ..|  ||.:     ..|.:..||||.|..:|..|.||...|    :.||.|||.||.|:::|:.|
  Rat   964 SAG--LFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLA 1026

  Fly   810 RQRGADETLFQRLDSEKA--------------------------TAVLSLQYRMNKTITRLANEL 848
            ...|.:.::.:||.|..|                          ...|...||.:..:..|.:.|
  Rat  1027 MAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLPLPASSPQVTKLVKNYRSHSALLALPSRL 1091

  Fly   849 TYGGDLK-CASDEVSGARFEVELL--------------NEA-----PRWVQRALTTHLEQAVTLI 893
            .|..:|: ||..:|..:....|.|              |||     |.|...|      :||.::
  Rat  1092 FYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFHGVRGNEAREGRSPSWFSPA------EAVQVM 1150

  Fly   894 NTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHLLRYL 958
                                                              .||      .||...
  Rat  1151 --------------------------------------------------RYC------CLLARN 1159

  Fly   959 LKSGYEASRIGVIAPYRAQVELFKKLASKLD-TDLECNTVDQFQGRDKNLIIYSCSKTGGDFSDM 1022
            :.|...:..||||.|||.|||..|.|...:| ||::..:|::|||::..:|:.|..::..|..:.
  Rat  1160 VSSQVSSKDIGVITPYRKQVEKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFED 1224

  Fly  1023 ERSREAEILEDQRRLTVAITRAKNKLILLGD 1053
            :| .....|.:.:|..|||||.|..||:||:
  Rat  1225 DR-YFLGFLSNSKRFNVAITRPKALLIVLGN 1254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859 34/146 (23%)
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 42/218 (19%)
TIGR00376 480..1069 CDD:273041 167/776 (22%)
P-loop_NTPase 636..859 CDD:304359 75/317 (24%)
AAA_12 815..1055 CDD:289832 64/286 (22%)
Mov10l1XP_017450774.2 PRK08581 657..>833 CDD:236304 18/175 (10%)
DEXXQc_Mov10L1 842..1079 CDD:350836 66/243 (27%)
SF1_C_Upf1 1080..1270 CDD:350195 57/238 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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