DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and Ighmbp2

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_113774.2 Gene:Ighmbp2 / 29532 RGDID:68325 Length:988 Species:Rattus norvegicus


Alignment Length:722 Identity:189/722 - (26%)
Similarity:290/722 - (40%) Gaps:174/722 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 SEADHAYVQHWCGLLALE---EQHNRQSSHVRSFWTKDPAEREKEGIAIRHLKL-VKGQEVILEE 505
            |....::|.....||.||   |...|:|      |.:..:.:|.:...:..||| |.||..    
  Rat     3 SSTVESFVAQQLQLLELERDAEVEERRS------WQEHSSLKELQSRGVCLLKLQVSGQRT---- 57

  Fly   506 GRYRQTLELGE--EADPSRDLSLSGFDLGEYVVISSTSRLA-VAAGFIVSI----------EARR 557
            |.|.|.|...|  :..|:..|..:.|..|:.|.:..|:..: :|.|.:..|          |:..
  Rat    58 GLYGQRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNESSQLATGVLTRITQKSVIVAFDESHD 122

  Fly   558 LDLRLERDLSQRY----SEETFIIDKHDSQSFATFNFTNLGMLLSEGERFQELRDIIVAKKPPEQ 618
            ..|.|:|:.:.|.    ::.|:   |...::..|....:.|...|       |.|:::....|..
  Rat   123 FQLNLDRENTYRLLKLANDVTY---KRLKKALLTLKKYHSGPASS-------LIDVLLGGSTPSP 177

  Fly   619 HKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLLGKSV 683
            ...:|.:....     ..|:..|:.|...||......:|.|.||||||.|:|.::......|..|
  Rat   178 ATEIPPLTFYN-----TTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237

  Fly   684 LITAQTHSAVDNLIMRLLPFGLPMMRLGSGSRIHKQLEEISEERLT------------------- 729
            |..|.::.|||||:.||......::|||..:|:   ||.:.:..|.                   
  Rat   238 LCCAPSNIAVDNLVERLALCKKQILRLGHPARL---LESVQQHSLDAVLARSDNAQIVADIRRDI 299

  Fly   730 -----KDCKTVEELEK------------------------ALGQPSIVGVTCLGCGH----PLFQ 761
                 |:.||.::.||                        :|....:|..|..|...    .|..
  Rat   300 DQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLP 364

  Fly   762 RRQFDYCIVDEATQVLQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEK 826
            ...||..:|||..|.|:.:...||:...|.:|.||.:||||...|.:|...|...:|.:||..:.
  Rat   365 EDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKH 429

  Fly   827 ATAV---LSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQ 888
            ..||   |::||||::.|||.|:|..|.|.| .|...|:|     .||.:.|   ..|.|.....
  Rat   430 GAAVVRMLAVQYRMHQAITRWASEAMYHGQL-TAHPSVAG-----HLLKDLP---GVADTEETSV 485

  Fly   889 AVTLINTGDC--LERCQEFVYASQRLVDTCSSIEQSFSEDK---DEIRKLTSKKRVSKYTNYCEA 948
            .:.||:|..|  ||                  :|:..|:.|   .|:|.:|              
  Rat   486 PLLLIDTAGCGLLE------------------LEEEDSQSKGNPGEVRLVT-------------- 518

  Fly   949 GIVMHLLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCS 1013
               :| ::.|:.:|.:|..|.|||||..||:|.::..|....:||..:||.||||:|..:|.:  
  Rat   519 ---LH-IQALVDAGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILT-- 577

  Fly  1014 KTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGD---------IKCLEQY----GPFRQ 1065
                 |....|..|...|.:.||:.||:|||:..:.::.|         :|.|..|    |..|.
  Rat   578 -----FVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRT 637

  Fly  1066 LFKHIPD 1072
            .|:::.|
  Rat   638 AFEYLDD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426
TIGR00376 480..1069 CDD:273041 178/679 (26%)
P-loop_NTPase 636..859 CDD:304359 82/277 (30%)
AAA_12 815..1055 CDD:289832 74/256 (29%)
Ighmbp2NP_113774.2 TIGR00376 19..640 CDD:273041 183/700 (26%)
SS DNA-binding. /evidence=ECO:0000250 637..783 2/8 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 651..722
R3H_Smubp-2_like 724..782 CDD:100070
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 765..820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 835..872
Nuclear localization signal. /evidence=ECO:0000255 857..861
ZnF_AN1 890..930 CDD:197545
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 943..988
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289214at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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