DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and Y53F4B.10

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_001366964.1 Gene:Y53F4B.10 / 190212 WormBaseID:WBGene00013157 Length:471 Species:Caenorhabditis elegans


Alignment Length:481 Identity:78/481 - (16%)
Similarity:148/481 - (30%) Gaps:180/481 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 KEGLLREVASGRNEQRDLLMLRNDLAYWLTREVAIP----------------ASKEDPLEQLPLP 397
            |..|||    |.|...::..:.:.::......|::|                |..:||:.....|
 Worm    17 KSKLLR----GLNSDNNIQSITHKVSEMKLDTVSVPVNSKFVPNNLESKTISAKLKDPILSDRHP 77

  Fly   398 EPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYVQHWCGLLALE 462
            ...|:|.                 ..:::.:..:|:|:|:                         
 Worm    78 FEDYYHD-----------------QQNVEQNSENPVKRLL------------------------- 100

  Fly   463 EQHNRQSSHVRSFWTKDPAEREKEGIAIRHLKLVKGQE-------------------VILEEGRY 508
              .|.....:::|..:.....:|.|..  |:::....:                   |:.:.|..
 Worm   101 --LNTNLDDIQAFRNETIPCMKKPGRC--HMRIPADSQRPPLSFFCGAKPSQPYALYVVAQGGTS 161

  Fly   509 RQTLELGEE--ADPSRDLSLSGFDLGEYVVISSTSRLAVAAGFIVSIEARRLDLRLERDLSQRYS 571
            .:...:.:|  ||...||..:......|.::|  .|.||.:.|::.      ||.:...|..||.
 Worm   162 LKCFSVFKELPADDRPDLFSADLSCFSYDILS--ERQAVVSDFLIG------DLIIVFSLEVRYG 218

  Fly   572 --EETFIIDKHDSQSFATFNFTNLGMLLSEGERFQELRDIIVAKKPPEQH----KVLPKIILTKG 630
              .::::.|........:..:.::       |:|..::..:...:|...|    |...::||.  
 Worm   219 VPPDSYLRDSTHVLKLESHKYWSI-------EKFAVVQRCVTQPEPFSVHQSHFKADKRLILV-- 274

  Fly   631 APILLNLNKVQQNAALRALTTSSHLL---IKG-----LPGTGKTQTLVALV----------RLLH 677
                        |..|..||..:.||   .:|     ||......||.:|.          |..|
 Worm   275 ------------NNILTPLTVPTKLLGESCRGVVRAFLPQAAPGLTLSSLKPGVLYEEVRRRTAH 327

  Fly   678 LLGKSVLITAQT--HSAVDNLIMRLLPFGLPMMRLGSGSRIHKQLEEISE--------------- 725
            |......::.|.  ...|||                 ||.:.:.:||..:               
 Worm   328 LGSHWEAMSPQVLDLEVVDN-----------------GSMLSRLVEECIDVNTEAIATLYEDRGT 375

  Fly   726 -----ERLTKDCKTVEELEKALGQPS 746
                 |::|...:|| .::..:|.||
 Worm   376 HPTKVEKVTCGLRTV-TIQFTIGTPS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 14/81 (17%)
TIGR00376 480..1069 CDD:273041 59/334 (18%)
P-loop_NTPase 636..859 CDD:304359 30/151 (20%)
AAA_12 815..1055 CDD:289832
Y53F4B.10NP_001366964.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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