DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and C41D11.6

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_491376.1 Gene:C41D11.6 / 183377 WormBaseID:WBGene00016565 Length:852 Species:Caenorhabditis elegans


Alignment Length:317 Identity:68/317 - (21%)
Similarity:119/317 - (37%) Gaps:83/317 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 EQHKVLPKIILTKGAPILLN--LN-------------KVQQNAALRAL--TTSSHLLIKGLPGTG 664
            :::|.|.......|.||:.:  ||             ..||:..::|.  .....|.:.|..|||
 Worm   583 DRNKGLATFAALNGGPIIASNGLNYPHKEFRYQNFVCSAQQSTFIQACCDLKLGALSLDGAFGTG 647

  Fly   665 KTQTLVA-LVRLLHLLGKSVLITAQTHSAV---DNLIMRLLPFGLPMMRLGSGSRIHKQLEEISE 725
            ||:.:.| .:...:...:.|:|:|..:.||   .:.|..|.|.|...:.....:|:.   :|...
 Worm   648 KTKAVAATAIEFSNQNIQRVIISANNNGAVKAIHDAIRSLAPRGRVKVVRAMSARLR---DEAKP 709

  Fly   726 ERLTKD------CKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQV----LQPT 780
            |.||:|      .:...|:.:::.:|::.|.      ||         .|:|.|..:    |.|:
 Worm   710 EVLTEDDFPILWREVFTEVVQSVNRPNVRGT------HP---------AIIDAARHLNAHGLLPS 759

  Fly   781 VLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAVLSLQYRMNKTITRLA 845
               |:::....|....|.:..|           ...|::..|.....||::         |...|
 Worm   760 ---PMLNNEIRVRCKAPYKTEP-----------PAHTIWTALMKIHETAII---------IGTTA 801

  Fly   846 NELTYGGDLKCAS--DEVSGARFEVELLNEA---PRWVQRALTTHLEQAVTLINTGD 897
            :..|...|:..||  :|:.     :.:|:||   |......|.||..:| ..:..||
 Worm   802 SIHTALNDIGFASKANEIG-----LVMLDEASQIPMIKIGGLATHFPKA-KFVLVGD 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426
TIGR00376 480..1069 CDD:273041 68/317 (21%)
P-loop_NTPase 636..859 CDD:304359 52/255 (20%)
AAA_12 815..1055 CDD:289832 21/88 (24%)
C41D11.6NP_491376.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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