DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2990 and znfx-1

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_001367278.1 Gene:znfx-1 / 174463 WormBaseID:WBGene00014208 Length:2443 Species:Caenorhabditis elegans


Alignment Length:967 Identity:184/967 - (19%)
Similarity:347/967 - (35%) Gaps:279/967 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 KHIQSALQEMLASSSL---AHLLYASNLI-------------QVEMEDHLMKFIDPIVSFV--AQ 251
            ||:...|:.:.:...|   .:|::.|.:|             |:..|..|||..:.:.|..  |:
 Worm   898 KHVLENLKRISSFKPLPFERYLVHGSKIIFRPNFQQAEKSEYQISEEKKLMKTYNELRSLAACAR 962

  Fly   252 YVKGEPPSVLLP----------------EVYRGQIH-EICDIEENLWVPQLGLKGK----VDVSV 295
            |.||:|    :|                |:.:..|. |...::|.::.|.:|:..|    :.::.
 Worm   963 YTKGKP----IPRGVDDDDEDYEFSKSRELSKEDIDLEYRQLQEPIFRPLVGVDIKDSNLIQINK 1023

  Fly   296 KVKN-QRQREEIIPLEL-KTGRASFSMEHKGQLLLYQLMHSAQGR-DTQSGLLLYLKEGLLREVA 357
            |..| .|..:|..|..: ::.|.:|....|.:|.|.|   ...|. .|..|:      .:::.:.
 Worm  1024 KWYNVSRLLDEFHPDYMDESQRLAFCNTFKYELSLIQ---GPPGTGKTHIGV------QIVKTIL 1079

  Fly   358 SGRNEQRDLLMLRNDLAYW-LTREVAIPASKEDPLEQLPLPEPVYHHSACGNCAYNTICSSFAQK 421
            ..|             :|| :|..:.:.......|:.  |.|.:|               ...:.
 Worm  1080 QNR-------------SYWKITEPILVVCFTNSGLDN--LLERIY---------------QMIEN 1114

  Fly   422 DSSLQLSDSHPLKKLMPQLLEHLSEADHAYVQHWCGLLALEEQHNRQSSHVRSFWTK--DPAERE 484
            |..|...:..      |:::...|:.|..|         |:.|:..:......:.:|  |.|:::
 Worm  1115 DEELSKDNGR------PKIIRFGSKCDSNY---------LKRQNVMRQDVYEQYKSKVSDGAQKK 1164

  Fly   485 --KEGIAIRHLK---LVKGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISSTSRLA 544
              |.|.|.||..   .:....:.....:......|....||:..:.:..|....           
 Worm  1165 MSKAGAARRHKADNLAISSYTLFCSRNKLLSYEMLSRVMDPNHQMEIQQFTYDH----------- 1218

  Fly   545 VAAGFIVSIEARRLDLR---------LERDLSQRYSEETFIIDKHDSQSFATFNFTNLGMLLSEG 600
                    ::.:.:.|.         ||||..:....:|....|...|.         ..|.||.
 Worm  1219 --------VDTKGIPLSPDEAIGCWLLERDFGKATKSQTKKAKKPKFQG---------AQLDSED 1266

  Fly   601 ERFQELRDIIVAKKPPEQ------HKVLPKI-----ILTKGAPILLNLNKVQQNAALRALTTSSH 654
            |.    :|....:...::      .|:|.|:     :...||.|   |:.|..:.|....|....
 Worm  1267 EN----KDYFTVEDSDDEEDELDDEKLLDKLFEKMNLECSGADI---LSAVHASHADEYYTKGPW 1324

  Fly   655 LLIKGLPGTGKTQTLVALV---------------RLLHLLG--KSVLITAQTHSAVDNLIMRLLP 702
            .:::     .|..::|.|:               ::.:|:.  |.:::::|.....|...::.: 
 Worm  1325 EIVQ-----DKRPSVVVLMEKKTKPCNAKFTVDEQINNLVSEIKDMILSSQPVPKKDLNDIKYI- 1383

  Fly   703 FGLPMMRLGS-------------GSRIHKQLEEISEERLTKDCKTVEELE-----KALGQPSIVG 749
            |.|..::..|             ...:.:|:.|..|.     |:..:..:     :.:....|:|
 Worm  1384 FSLARLKRWSLYITWCDALRSIVTENLPRQIREYREA-----CENFKNAQNRVDAEIMRMTMIIG 1443

  Fly   750 VTCLGCG--HPLFQRRQFDYCIVDEATQVLQPTVLRPLIH-CSKFVLVGDPEQLPPIVRSKE-AR 810
            .|..||.  .|..::......||:||.:||:..::..:|. ....|::||.:||.|.....| ..
 Worm  1444 ATTTGCSRLRPTLEKVGPRILIVEEAAEVLEAHIISAMISTVEHVVMIGDHKQLRPNPAVHELGV 1508

  Fly   811 QRGADETLFQRL-DSEKATAVLSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEA 874
            ..|...::|:|| :.....:.|..|:|||.||:....:|::       .|.|:.|. .|.|..:.
 Worm  1509 AYGLRISMFERLVERGLPFSQLRQQHRMNLTISDKIVKLSF-------YDNVTDAE-NVGLYPDV 1565

  Fly   875 PRWVQRALTTHLEQAVTLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRV 939
                 :.:.|:|                  |.::           ..|..|..||:         
 Worm  1566 -----QGMATNL------------------FFWS-----------HTSMEESPDEV--------- 1587

  Fly   940 SKYTNYCEAGIVMHLLRYLLKSGYEASRIGVIAPYRAQVEL-FKKLASKLDTDLECN-----TVD 998
             .:.|..|..:.:.|:::|||..|..:.|.|:|.|.||..| :::.|:...:..:.|     |||
 Worm  1588 -SWLNKHEISMTVALVKHLLKQNYTTNDIVVLATYSAQKNLMYREYANVFGSTPDSNVIPVETVD 1651

  Fly   999 QFQGRDKNLIIYSC--SKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGD 1053
            .|||:::.::|.|.  |..||     ..:.....|....|:.||:|||::.:.::|:
 Worm  1652 SFQGKERKIVIVSLVRSHRGG-----RENTGIGFLAVANRICVALTRAQHGMYIIGN 1703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859 26/130 (20%)
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 25/139 (18%)
TIGR00376 480..1069 CDD:273041 126/647 (19%)
P-loop_NTPase 636..859 CDD:304359 50/262 (19%)
AAA_12 815..1055 CDD:289832 58/248 (23%)
znfx-1NP_001367278.1 DEAD-like_helicase_N 1040..>1133 CDD:421690 20/137 (15%)
AAA_11 <1328..1499 CDD:404072 32/181 (18%)
EEXXEc_NFX1 <1434..1534 CDD:350694 25/99 (25%)
SF1_C_Upf1 1536..1722 CDD:350195 52/225 (23%)
exchanger_TraA <1763..2130 CDD:411343
NF-X1-zinc-finger 2017..>2057 CDD:100116
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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