DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2990 and zgrf1

DIOPT Version :9

Sequence 1:NP_727386.1 Gene:CG2990 / 31934 FlyBaseID:FBgn0030170 Length:1100 Species:Drosophila melanogaster
Sequence 2:XP_031758647.1 Gene:zgrf1 / 100327248 XenbaseID:XB-GENE-6461443 Length:1948 Species:Xenopus tropicalis


Alignment Length:1270 Identity:257/1270 - (20%)
Similarity:443/1270 - (34%) Gaps:400/1270 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 EVVRLEQLPNRKGLKVHVKRISGGDPETADCQLLPPWN--CMPMQVGDTVSLLGKWD----PSAG 133
            |.:.:|..|.:.| .|||       |:...|....|:.  .:|...|.|......||    ||. 
 Frog   811 EELFVEDFPAKPG-TVHV-------PQGTHCNNAVPFKAFALPQWDGGTQQSDCDWDLSQWPSR- 866

  Fly   134 CYVVDKEQGYCVSHPDF----------------LISGTTVTGSLFCKRKSVLQERFRGLDSGNSV 182
             ..:..:.......||.                |......|..:.|...::.|            
 Frog   867 -ETIKPDLTIVQEKPDIDRPFSWHENTIMQLKELKDTQNATQDISCTNSTISQ------------ 918

  Fly   183 MVIGTLVHELLQKVLRQKLFDKKHIQSALQE-----MLASSSLAHLLYAS-NLIQVEMEDHLMK- 240
              :|:.:..||..|....|.|......|..|     :..:.|.:..:|.: |||.|.:.:..:: 
 Frog   919 --VGSKLQRLLPVVTTPDLADSTRPVPAGYEYKKCFLDTNCSPSPNIYTTKNLIDVPVHNAFVEN 981

  Fly   241 ------FIDPI----------------------------------VSFVAQYVKGEPPSVLLPEV 265
                  |:.|.                                  ..|.|:.:.|:.|.:.....
 Frog   982 IEEGTGFLKPTEDRNSPKRQSKWTKYQNKSLCSRTNENVEDMKANEEFFAKSLFGKEPYMADKVD 1046

  Fly   266 YRGQIHEIC-----DI--EENLWVPQLGLKGKVDVSVKVKNQRQREEIIPLELKTGRASFSMEHK 323
            .:..:..||     |.  ::|..:.|.||..|...::.:           .:|..|:.||..:..
 Frog  1047 DKASVESICLTLLKDTLSKKNSGLVQHGLHTKRHPTISI-----------AQLNKGKTSFLSDSS 1100

  Fly   324 GQLLLYQLMHSAQGRDTQSGL----------LLYLKEGLLREV-ASGRNEQRDLLML-------- 369
            |.:.:...:|.......||.:          :||......:.| .:...|..:::|.        
 Frog  1101 GNVKISCELHFPSRETVQSTVSIPKREISIPILYQSVTHYKHVFTAALTEHLNIMMFELSQRLYK 1165

  Fly   370 ---RNDLAYWLTREVAIPASKEDP----LEQLPL---------PEPVYHHSAC-----GNCAY-- 411
               :.|::::.:...|....|.:.    |.|.|.         |........|     ..|.:  
 Frog  1166 ALSKVDMSFYTSSRAAGEMGKHNVTPLCLHQQPAKLVMVKKEGPNKGRFFYTCDAPKSDQCKFFK 1230

  Fly   412 ---NTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYVQHWCGLLALEEQHNRQSSHVR 473
               .|.|||..|         .|...|::...::.::....::      .:||.|:.:.....|.
 Frog  1231 WLNETQCSSPVQ---------GHAQPKVVMGDMKSVASFVRSH------KVALYEESHLMVRKVS 1280

  Fly   474 SFWTKDPAEREKEGIAIRHLKLVKGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVIS 538
            .|..|...         :..|::........|.:.:..|:|      :|..:.|.:...:..|:|
 Frog  1281 GFQNKSFG---------KFKKIINANSDFAGESKTKLYLKL------NRKENSSAYSKDDLWVVS 1330

  Fly   539 STSRLAVAAGFIV-----------SIEARRL------------------------DLRLERDLSQ 568
            .|........|:.           .||.:.|                        :|...|::.:
 Frog  1331 KTIDFEPVDTFVAFSVFFGPSANNEIEIQPLKGYSPSNWPSNTLVHAVLVCNASTELTSLRNIQE 1395

  Fly   569 RYSEETFIIDKHDSQSFATFNFTNLGMLLSEGERFQELRDIIVAKKPPEQHKVLPK--------I 625
            ..:..|..|..|              :|..:.|:..|.:......|||.....:|:        .
 Frog  1396 HLNPSTLPIMPH--------------LLKMQSEQEGESKTNTGKFKPPSLTAKIPQRCELPSCSF 1446

  Fly   626 ILTKGAPIL--LNLNKVQQNAAL---RALTTSSH---------LLIKGLPGTGKTQTL-VALVRL 675
            ||.|...::  ..||:.|..|.:   :.:||::.         .:|.|:.|.||:..| |.::.|
 Frog  1447 ILAKSQEMIEQFRLNEDQATALMQIAQMMTTAAGSYKAVAPPITVIHGVFGAGKSYLLSVVVLFL 1511

  Fly   676 LHLLGK------------SVLITAQTHSAVDNLIMRLLPFGL-PMMRLGSGSRIHKQL------- 720
            :.|..:            .:||::.|:.|||.:::.||..|. ..:|:||..:|.|.:       
 Frog  1512 VQLFERGNPAEGYEASPWKILISSSTNVAVDRVLLGLLDLGFSQFVRVGSIRKIAKPILPFSLHA 1576

  Fly   721 ------EEISE-ERLTKDCKTVEELEKA-----------------LGQPSIVGVTCLGCGHPLFQ 761
                  |:|.| ..|.||..|  .:|||                 |||..:||.||..|......
 Frog  1577 GSENENEQIKELLALLKDDLT--PVEKAYVRKSIEQHKLGTNKALLGQVRVVGATCAACPFACMS 1639

  Fly   762 RRQFDYCIVDEATQVLQPTVLRPL--IHCSKFVLVGDPEQLPPIVRSKE-ARQRGADETLFQR-- 821
            ..:|...::||.:|:.:|..:.|:  ..|.|.:|||||:||.|.::..| |.::|.::|||.|  
 Frog  1640 NLKFPVVVLDECSQMTEPASMLPVARFQCEKLILVGDPKQLSPTIQGSEPAHEKGLEQTLFSRLC 1704

  Fly   822 LDSEKATAVLSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFE--VELLNEAPRWVQRALTT 884
            |...|| .:|..|||.:..|..:||||.|...|      ::|...|  ..||:..|         
 Frog  1705 LMGHKA-IILRTQYRCHPAICSIANELFYDSHL------INGVSEEDRKPLLDWLP--------- 1753

  Fly   885 HLEQAVTLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAG 949
                  ||     |...           |:....:|.:                 :.:.|..||.
 Frog  1754 ------TL-----CFYN-----------VNGTEQVEGN-----------------NSFYNMEEAN 1779

  Fly   950 IVMHLLRYLLKSGYEASRIGVIAPYRAQV-ELFKKLASKLDTD------LECNTVDQFQGRDKNL 1007
            ..:.|::.|:.||.|.|.||||..|::|: ::|..|||....|      ::.:|||.|||.:|.:
 Frog  1780 FTVKLIQSLIASGIEGSMIGVITLYKSQMYKIFSLLASSAHCDSTDIKAVQVSTVDAFQGAEKEI 1844

  Fly  1008 IIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHIPD 1072
            ||.||.:|          |:...::.::|:.|.:||.|..|:::.::.||.:    .:|::|:..
 Frog  1845 IILSCVRT----------RQVGFIDSEKRMNVGLTRGKRHLLIIANLACLRK----NKLWEHVIH 1895

  Fly  1073 RCRL-------------KLEEGRMEFGWQRIQEDL 1094
            .|..             ||....:.:..::|:||:
 Frog  1896 HCERQKNGLKHVSQWEEKLNAILLRYQEKKIEEDM 1930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2990NP_727386.1 Dna2 99..297 CDD:285859 44/273 (16%)
Cas4_I-A_I-B_I-C_I-D_II-B <283..415 CDD:294426 27/176 (15%)
TIGR00376 480..1069 CDD:273041 164/704 (23%)
P-loop_NTPase 636..859 CDD:304359 84/284 (30%)
AAA_12 815..1055 CDD:289832 67/250 (27%)
zgrf1XP_031758647.1 DUF2439 6..71 CDD:402138
zf-GRF 1191..1234 CDD:399670 6/42 (14%)
DEAD-like_helicase_N 1460..1718 CDD:421690 75/260 (29%)
AAA_12 1695..1880 CDD:404073 67/249 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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