DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Fgg

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001304034.1 Gene:Fgg / 99571 MGIID:95526 Length:443 Species:Mus musculus


Alignment Length:284 Identity:86/284 - (30%)
Similarity:132/284 - (46%) Gaps:55/284 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAA 120
            |.|.:|.::|:::..|:.|..:..: .|..:                |::...:.|.:||.||  
Mouse   141 SNNQKITNLKQKVAQLEAQCQEPCK-DSVQI----------------HDTTGKDCQEIANKGA-- 186

  Fly   121 VPITPANCLKQQHGVVRIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFG 185
                      ::.|:..|||....:.|.|:|:......|||::..|.|||.||.:.|..||.|||
Mouse   187 ----------KESGLYFIRPLKAKQQFLVYCEIDGSGNGWTVLQKRIDGSLDFKKNWIQYKEGFG 241

  Fly   186 PL----TTEFFIGLDKLHQIT--SSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGD 244
            .|    ||||::|.:|:|.|:  |:..|.|.:||::.......|.|..|.:|.||::|||.....
Mouse   242 HLSPTGTTEFWLGNEKIHLISMQSTIPYALRIQLKDWNGRTSTADYAMFRVGPESDKYRLTYAYF 306

  Fly   245 YHGDAADA--------------LRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPF 295
            ..|||.||              ...|.|.:|||.|..||:.|.|| |:|.|:.|:...|:..:..
Mouse   307 IGGDAGDAFDGYDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNC-AEQDGSGWWMNKCHAGHLN 370

  Fly   296 GLYQR----LLERDVDGF-KGILW 314
            |:|.:    ......:|| .||:|
Mouse   371 GVYHQGGTYSKSSTTNGFDDGIIW 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 73/217 (34%)
FggNP_001304034.1 Fib_alpha 29..171 CDD:462570 7/46 (15%)
Fibrinogen_C 174..413 CDD:395095 78/234 (33%)

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