DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and fibcd1

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_031746424.1 Gene:fibcd1 / 779974 XenbaseID:XB-GENE-483361 Length:464 Species:Xenopus tropicalis


Alignment Length:372 Identity:113/372 - (30%)
Similarity:166/372 - (44%) Gaps:73/372 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALVMAMACLSTTQTDLGG---GLLVPPSLGNASSSSCPVSALSGLTTRMQS-----------LNN 59
            ||:.|:|...:.|...||   .||        :|.|..|:.:.....|.::           |..
 Frog   117 ALLSALADHDSEQKVAGGKERALL--------TSLSDQVAQMVSQVARQRADWENVKKVQNGLGA 173

  Fly    60 EIASVKEQIGSLQEQLVDLRRAGSAPVVGLAS-----------------PNALA--SRFPFSHNS 105
            ||.::|.:    |.:|:.|...|.:.|..|.|                 |...|  .|.|    |
 Frog   174 EIGALKNE----QGRLIKLLSEGQSHVAQLGSSVSEVLETVQRELGSGRPRVKADLQRAP----S 230

  Fly   106 LDIEPQLLANGGAAAVPITPANCL------KQQHGVVRIRPRSNVEPFFVFCDQKVRNGGWTMVV 164
            ....|:..|||.      .|.:|.      :|:.||..:.|......|.||||.....||||:..
 Frog   231 RSSRPRGCANGS------KPRDCYDIYMSGQQEDGVYSVFPIHYPSGFQVFCDMTTDGGGWTVFQ 289

  Fly   165 NRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFS 229
            .|.|||.:|.:.|..|:.|||.||.|.::||.::|.:|...:|:|.:.|::.:....||||:.|.
 Frog   290 RREDGSVNFFQGWEQYRDGFGKLTGEHWLGLQRIHLLTMQTHYQLRIDLEDFENATAYALYNTFG 354

  Fly   230 IG-----SESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSC 289
            :|     .|.:.|.:.: .||.|.|.|:|..|:|.||:|.|..||.:|.|||:...||:|| .:|
 Frog   355 VGLFSVNPEEDGYPITI-SDYTGTAGDSLGKHSGMKFTTKDMDNDHSENNCASFYHGAWWY-RNC 417

  Fly   290 NLTNPFGLYQRLLERD-VDGFKGILWRGFLNGPKGSLKIVRMMVRPR 335
            :.:|..|.|.|..... .||.:...|.|:    :.|||...|.:||:
 Frog   418 HTSNLNGQYLRGHHASYADGIEWSSWTGW----QYSLKFTEMKIRPQ 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 79/223 (35%)
fibcd1XP_031746424.1 FReD 244..459 CDD:238040 78/220 (35%)

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