DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and TNXB

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001415264.1 Gene:TNXB / 7148 HGNCID:11976 Length:4491 Species:Homo sapiens


Alignment Length:263 Identity:88/263 - (33%)
Similarity:123/263 - (46%) Gaps:41/263 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SHNSLDIEPQLLANG--------------------GAAAVPITPANCLKQ-QHGVVRIRP----- 140
            ||..|.:.|....|.                    |...:|. |.:|.:: |:|....|.     
Human  4232 SHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLRIPF-PRDCGEEMQNGAGASRTSTIFL 4295

  Fly   141 RSNVE-PFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSS 204
            ..|.| |..||||.:...|||.:...|.||..||.|.|.||..|||.::.||::|.:.||.:|.:
Human  4296 NGNRERPLNVFCDMETDGGGWLVFQRRMDGQTDFWRDWEDYAHGFGNISGEFWLGNEALHSLTQA 4360

  Fly   205 DNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVND 269
            .:|.:.|.|: ...|..:|.||.|.:.|.:|.|||::.| |||.|.|::..|:|..||..||  |
Human  4361 GDYSMRVDLR-AGDEAVFAQYDSFHVDSAAEYYRLHLEG-YHGTAGDSMSYHSGSVFSARDR--D 4421

  Fly   270 ENEQ--NCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKIVRMMV 332
            .|..  :||....||:|| .:|:..|..|||...:  |..|.....|:||    :.|:....|.:
Human  4422 PNSLLISCAVSYRGAWWY-RNCHYANLNGLYGSTV--DHQGVSWYHWKGF----EFSVPFTEMKL 4479

  Fly   333 RPR 335
            |||
Human  4480 RPR 4482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 79/220 (36%)
TNXBNP_001415264.1 C_rich_MXAN6577 <191..295 CDD:469225
EGF_Tenascin 249..275 CDD:480934
PTZ00214 <254..669 CDD:173479
EGF_Tenascin 311..337 CDD:480934
C_rich_MXAN6577 314..418 CDD:469225
EGF_Tenascin 373..399 CDD:480934
EGF_Tenascin 559..585 CDD:480934
EGF_Tenascin 719..745 CDD:480934
fn3 762..831 CDD:394996
fn3 843..919 CDD:394996
fn3 1114..1161 CDD:394996
fn3 1308..1388 CDD:394996
FN3 1403..1485 CDD:238020
fn3 1512..1589 CDD:394996
fn3 1623..1693 CDD:394996
FN3 <1673..2048 CDD:442628
FN3 2020..2109 CDD:238020
fn3 2132..2202 CDD:394996
fn3 2235..2308 CDD:394996
fn3 2346..2416 CDD:394996
fn3 2445..2515 CDD:394996
fn3 2551..2624 CDD:394996
FN3 <2665..>2895 CDD:442628
fn3 2773..2843 CDD:394996
fn3 2876..2956 CDD:394996
fn3 2990..3057 CDD:394996
fn3 3092..3172 CDD:394996
fn3 3206..3273 CDD:394996
fn3 3308..3381 CDD:394996
FN3 3384..>3762 CDD:442628
fn3 3809..3884 CDD:394996
fn3 3903..3985 CDD:394996
fn3 4005..4083 CDD:394996
FN3 <4061..>4251 CDD:442628 5/18 (28%)
fn3 4182..4259 CDD:394996 5/26 (19%)
Fibrinogen_C 4273..4482 CDD:395095 79/220 (36%)
Blue background indicates that the domain is not in the aligned region.

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