DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and TNR

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_003276.3 Gene:TNR / 7143 HGNCID:11953 Length:1358 Species:Homo sapiens


Alignment Length:328 Identity:107/328 - (32%)
Similarity:150/328 - (45%) Gaps:46/328 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LLVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVD-----------LRRA 81
            ||.||:...||..:...:.:|....|.: :.|.:.:.|...||.:|.:||           |...
Human  1040 LLDPPANLTASEVTRQSALISWQPPRAE-IENYVLTYKSTDGSRKELIVDAEDTWIRLEGLLENT 1103

  Fly    82 GSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQQHGVVRIRPRSNVEP 146
            ....::..|.....:|          |.......||  .|...|.:|  .|| ::.....|.|.|
Human  1104 DYTVLLQAAQDTTWSS----------ITSTAFTTGG--RVFPHPQDC--AQH-LMNGDTLSGVYP 1153

  Fly   147 FF----------VFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQI 201
            .|          |:||.....|||.:...|.:|..||.||||||::|||.:..||::|||.:|:|
Human  1154 IFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRI 1218

  Fly   202 TSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDR 266
            ||...|||.|.::: .||..:|.||.||:......|:|.: |.|:|.|.|:|..|.|:.|||.||
Human  1219 TSQGRYELRVDMRD-GQEAAFASYDRFSVEDSRNLYKLRI-GSYNGTAGDSLSYHQGRPFSTEDR 1281

  Fly   267 VNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKIVRMM 331
            .||....|||....||:|| .:|:.||..|.|..  .|...|.....|:|.    :.|:..|.|.
Human  1282 DNDVAVTNCAMSYKGAWWY-KNCHRTNLNGKYGE--SRHSQGINWYHWKGH----EFSIPFVEMK 1339

  Fly   332 VRP 334
            :||
Human  1340 MRP 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 85/222 (38%)
TNRNP_003276.3 EGF_Tenascin 203..231 CDD:376143
C_rich_MXAN6577 207..312 CDD:469225
EGF_Tenascin 235..261 CDD:480934
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..583 CDD:394996
FN3 <566..919 CDD:442628
fn3 954..1026 CDD:394996
FN3 1042..1127 CDD:238020 17/95 (18%)
FReD 1133..1342 CDD:238040 83/220 (38%)
Blue background indicates that the domain is not in the aligned region.

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