DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and LOC594984

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001025596.1 Gene:LOC594984 / 594984 XenbaseID:XB-GENE-29099003 Length:318 Species:Xenopus tropicalis


Alignment Length:195 Identity:75/195 - (38%)
Similarity:108/195 - (55%) Gaps:4/195 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 RSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSD 205
            |.|..|..||||.:...|||.:...|.|||.||.::|..||.|||...:||::|.:.||.:|::.
 Frog   127 RPNGLPLPVFCDMETDGGGWIVFQRRKDGSVDFFQEWDSYKRGFGRQDSEFWLGNENLHLLTATG 191

  Fly   206 NYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDE 270
            |::|.|.|.:......:|.|.:|.||.||..|.|::.|...|||.|:|..|..::||:.||.||.
 Frog   192 NFQLRVDLMDFDSNRTFASYSNFRIGGESRNYTLSLGGFTGGDAGDSLSGHKNREFSSKDRDNDS 256

  Fly   271 NEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKIVRMMVRPR 335
            :..:||.:..||:||.| |:.:|..|||  |..:......|:.|:.. .|...|.|:..|..||:
 Frog   257 SPTSCAERYKGAWWYSG-CHTSNLNGLY--LGGKHGSFANGVNWKSG-GGYNYSYKVSEMKFRPQ 317

  Fly   336  335
             Frog   318  317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 74/193 (38%)
LOC594984NP_001025596.1 Collagen 45..99 CDD:460189
FReD 107..316 CDD:238040 73/192 (38%)
Blue background indicates that the domain is not in the aligned region.

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