DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and fgb

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001107962.1 Gene:fgb / 594921 XenbaseID:XB-GENE-483216 Length:490 Species:Xenopus tropicalis


Alignment Length:419 Identity:96/419 - (22%)
Similarity:163/419 - (38%) Gaps:123/419 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TTQTDLGGGLLVPPSLGNASSSSCP----------------------VSALSGLT---------- 51
            |...|.||.......||....:.|.                      |.:||.||          
 Frog    88 TEYPDAGGCKHAYEELGTLCPTGCELRTTLLKQERNVKTGISDVRGRVESLSQLTNNIYRYTNVL 152

  Fly    52 ------TRMQSLNNE----------------------------IASVKEQIGSLQEQLVDLRRAG 82
                  |:.|:|:|:                            |.::::.:.:::.::..|..|.
 Frog   153 SQKMKETQQQALDNQNVINEYNLEVEEQYTFIKENIDNKIPSNIRTLRQVLENVRSKIQKLEIAI 217

  Fly    83 SAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQQHGVVRIRPRSNVEPF 147
            :..|....||.......|.. :..:.| ::...||             :...:..|:|.|...||
 Frog   218 ATQVENCRSPCVTNCPIPVV-SGKECE-EIYRKGG-------------ETSEMYLIQPDSFFRPF 267

  Fly   148 FVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTT-----------EFFIGLDKLHQI 201
            .|:||....:||||::.||.|||.:|.|.|..||.|||.:..           |:::|.:|:.|:
 Frog   268 KVYCDMATHDGGWTVIQNRQDGSVNFGRTWDSYKSGFGNIAANGGKGICDMPGEYWLGNEKISQL 332

  Fly   202 TSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRD----------- 255
            |:....|.|:::::.......|.|..|::.:|:.:|:|:|.| |.|.|.:||.:           
 Frog   333 TNLGATEALIEMEDWDGAKVTAQYTGFTVQNEANKYQLSVSG-YKGTAGNALMEGASQLKGENRT 396

  Fly   256 ---HTGKKFSTHDRVND-----ENEQNCAAQQSGAFWYGGSCNLTNPFGLYQ-------RLLERD 305
               |.|..|||.||.||     :..:.|:.:..|.:|| ..|:..||.|.|.       .:.:..
 Frog   397 MTIHNGMFFSTFDRDNDGWQHADPNKQCSKEDGGGWWY-NRCHAANPNGRYYWGGYYTWDMAKHG 460

  Fly   306 VDGFKGILWRGFLNGPKGSLKIVRMMVRP 334
            .|  .|::|..:.:. ..|:|.:.:.:||
 Frog   461 TD--DGVVWMNWKDS-WYSMKNMCIKIRP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 70/249 (28%)
fgbNP_001107962.1 Fib_alpha 92..235 CDD:462570 21/142 (15%)
Fibrinogen_C 238..487 CDD:395095 73/268 (27%)

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