DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and fibcd1b

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_005171959.1 Gene:fibcd1b / 567525 ZFINID:ZDB-GENE-070424-245 Length:492 Species:Danio rerio


Alignment Length:294 Identity:91/294 - (30%)
Similarity:146/294 - (49%) Gaps:47/294 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 MQSLNNEIASVKEQIGSLQEQL-VDLRRAGSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGG 117
            :.|:::.:.:::::.|.|:.:: .||:|   |||.|:.....                   |||.
Zfish   225 VNSVSDALNAMQKETGGLKARVKADLQR---APVRGVRLKGC-------------------ANGS 267

  Fly   118 AAAVPITPANCL------KQQHGVVRIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRK 176
                  .|.:|.      :::.|:..:.|......|.|:||.....||||::..|.|||.:|.|:
Zfish   268 ------RPRDCSDIYASGQREDGIYSVFPTHYPAGFQVYCDMSTDGGGWTVIQRREDGSVNFFRE 326

  Fly   177 WADYKIGFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIG-----SESEQ 236
            |..|:.|||.:|.|:::||.::|.::...||||.:.|::.:....:|.|..|.:|     .|.:.
Zfish   327 WDSYREGFGKITGEYWLGLKQIHALSIQGNYELRIDLEDFENSTAFAQYGVFGVGLFSVDPEDDG 391

  Fly   237 YRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRL 301
            |.|.: .||.|.|.|:|..|.|.||:|.||.||.:|.|||:...||:|| .:|:.:|..|.|.|.
Zfish   392 YPLTI-ADYTGTAGDSLLKHNGMKFTTKDRDNDHSENNCASFYHGAWWY-RNCHTSNLNGQYLRG 454

  Fly   302 LERD-VDGFKGILWRGFLNGPKGSLKIVRMMVRP 334
            .... .||.:...|.|:    :.|||...|.:||
Zfish   455 QHTSYADGIEWSSWTGW----QYSLKFTEMKIRP 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 78/224 (35%)
fibcd1bXP_005171959.1 FReD 269..484 CDD:238040 76/220 (35%)

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