DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Angptl3

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001386181.1 Gene:Angptl3 / 502970 RGDID:1564505 Length:455 Species:Rattus norvegicus


Alignment Length:350 Identity:97/350 - (27%)
Similarity:156/350 - (44%) Gaps:81/350 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LTTRMQSLNNEIASVKEQIGSLQEQLVDLRR----AGSAPVVGLASPNALASRFPFSHNSL---- 106
            |.::::||..|..:::.::.:|:|||..|.:    |...|.|     .:|.|......||:    
  Rat   120 LNSKLESLLEEKMALQHRVRALEEQLTSLVQNPPGAREHPEV-----TSLKSFVEQQDNSIRELL 179

  Fly   107 ------------------DIEPQLLANG----------GAAAVPIT-----------------PA 126
                              :||.||...|          .....|.|                 ||
  Rat   180 QSVEEQYKQLSQQHIQIKEIENQLRKTGIQEPTENSLYSKPRAPRTTPPLHLKEAKNIEQDDLPA 244

  Fly   127 NCL----KQQH--GVVRIRPRSNVEPFFVFCDQKVRNG-GWTMVVNRYDGSEDFNRKWADYKIGF 184
            :|.    :.:|  ||..|||.|: :.|.|:||  .::| ..|::.:|.|||::||:.|.:|:.||
  Rat   245 DCSAIYNRGEHTSGVYTIRPSSS-QVFNVYCD--TQSGTPRTLIQHRKDGSQNFNQTWENYEKGF 306

  Fly   185 GPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDA 249
            |.|..||::||:|::.|....||.|.::||:.|....||.|. |.:|:....|.|:| .:...:.
  Rat   307 GRLDGEFWLGLEKIYAIVKQSNYILRLELQDWKDSKHYAEYS-FHLGNHETNYTLHV-AEIAANI 369

  Fly   250 ADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQR-LLERDVDGFKGIL 313
            .:||.:|....|||.|. ..:.:..|....||.:|:...|...|..|.|.: ..:...:..:||.
  Rat   370 PEALPEHRDLMFSTWDH-RAKGQLYCPESYSGGWWFSDMCGENNLNGKYNKPRAKSKPERRRGIS 433

  Fly   314 WRGFLNGPKG----SLKIVRMMVRP 334
            ||     |:|    |:|..:||::|
  Rat   434 WR-----PRGGKLYSIKSSKMMLQP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 74/240 (31%)
Angptl3NP_001386181.1 GumC <90..>205 CDD:442439 20/89 (22%)
FReD 241..453 CDD:238040 73/222 (33%)

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