DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1889 and LOC4576360

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_001231036.3 Gene:LOC4576360 / 4576360 VectorBaseID:AGAMI1_008832 Length:309 Species:Anopheles gambiae


Alignment Length:333 Identity:109/333 - (32%)
Similarity:161/333 - (48%) Gaps:39/333 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VMAMACLSTTQTDLGGGLLVPPSLGNASSS------SCPVSALSGLTTRMQSLNNEIASVKEQIG 69
            :|...||.........|||..    |.|:|      .|..:.  ||.....:|...:...||.  
Mosquito     4 IMFKTCLGIVLLICCDGLLAQ----NVSNSYYWGVQHCGYAL--GLVMNELNLLGHLIIEKEV-- 60

  Fly    70 SLQEQLVDLRRAGSAPVVGLASPNALASRFP-FSHNSLDIEPQLLANGGAAAVPITPANCLKQQH 133
            .||.:|.||    |:.:..|.......:..| |:....|:         ..:...||..      
Mosquito    61 QLQSKLYDL----SSKIDSLMQQKCNTTTLPVFNETKDDV---------YRSCKETPTT------ 106

  Fly   134 GVVRIRPRSNV-EPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDK 197
            ||..|:|.... ||..|.|||:..:|||.::.:|:|||.:|.|.|.:||.|||.|..||::|||:
Mosquito   107 GVYMIQPEKPFKEPITVLCDQEYESGGWIVIQHRFDGSTNFYRNWKEYKNGFGNLDGEFWLGLDR 171

  Fly   198 LHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFS 262
            ::|:|.|..|||:|.|::......:|.||.|.|..|::.|.|:.:..:.|.|.|:|.:..|.|||
Mosquito   172 IYQLTVSQPYELVVLLEDFDGNKTFARYDQFEIADENQMYMLSKIEGFSGPAGDSLGNAKGMKFS 236

  Fly   263 THDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKI 327
            |.|..||..:.:||...:||:|| .:|:.:|..|.|.|  ....:..||::|..| .|...|||:
Mosquito   237 TLDSDNDIAKDSCAVTFTGAWWY-NACHASNLNGQYLR--GETTECGKGMVWDTF-RGHCHSLKM 297

  Fly   328 VRMMVRPR 335
            .:||:||:
Mosquito   298 AKMMIRPK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 83/212 (39%)
LOC4576360XP_001231036.3 None

Return to query results.
Submit another query.