DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Fga

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001008724.1 Gene:Fga / 361969 RGDID:2603 Length:782 Species:Rattus norvegicus


Alignment Length:339 Identity:106/339 - (31%)
Similarity:148/339 - (43%) Gaps:65/339 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TTQTDLGGGLLVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLR--RA 81
            |:.:|:...:..|.|.....|||...|.:....|:...:.:|.||...|.|       |.|  :.
  Rat   482 TSDSDIFTDIENPSSHVPEFSSSSKTSTVRKQVTKSYKMADEAASEAHQEG-------DTRTTKR 539

  Fly    82 GSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQQHGVVRIRPRSNVEP 146
            |.|                  ....|.:..|..:...|            |:|:..|:...:.:.
  Rat   540 GRA------------------RTMRDCDDVLQTHPSGA------------QNGIFSIKLPGSSKI 574

  Fly   147 FFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTT----EFFIGLDKLHQITSSDNY 207
            |.|:|||:...|||.::..|.|||.:|||.|.|||.|||.|..    ||::|.|.||.:|...:.
  Rat   575 FSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDKGEGEFWLGNDYLHLLTLRGSV 639

  Fly   208 ELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRD-----------HTGKKF 261
             |.|:|::...:..||.| ||.:|||:|.|.|.| ..|.|.|.|||.:           |:..:|
  Rat   640 -LRVELEDWAGKEAYAEY-HFRVGSEAEGYALQV-SSYQGTAGDALMEGSVEEGTEYTSHSNMQF 701

  Fly   262 STHDRVNDENEQNCAAQQSGAFWYGGSCNLTN------PFGLYQRLLERDVDGFKGILWRGFLNG 320
            ||.||..|:.|:|||....|.:|| .||...|      |.|.|........:...|::|..| .|
  Rat   702 STFDRDADQWEENCAEVYGGGWWY-NSCQAANLNGIYYPGGTYDPRNNSPYEIENGVVWVPF-RG 764

  Fly   321 PKGSLKIVRMMVRP 334
            ...||:.|||.:||
  Rat   765 ADYSLRAVRMKIRP 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 85/233 (36%)
FgaNP_001008724.1 Fib_alpha 50..189 CDD:462570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..374
Fibrinogen_aC 388..453 CDD:432370
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 522..542 8/26 (31%)
FReD 546..779 CDD:238040 88/250 (35%)
Blue background indicates that the domain is not in the aligned region.

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