DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1889 and sca

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_061500368.1 Gene:sca / 3290292 VectorBaseID:AGAMI1_010147 Length:772 Species:Anopheles gambiae


Alignment Length:350 Identity:87/350 - (24%)
Similarity:130/350 - (37%) Gaps:76/350 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASPN 93
            ||...:.||:.|      :..:...:.:|..|..:||...|.:.|...:|.|..||.|:      
Mosquito   394 LVREEVHNAAKS------IQAMAVSVSALQEERDTVKRLQGEVHELKGELARIRSAAVL------ 446

  Fly    94 ALASRFPFSHNSLD-IEPQLLANGGAAAVPITPANCLKQ-----------QH------------- 133
                ....:||.|: :|....::...::||..|...|::           :|             
Mosquito   447 ----HREMAHNRLEKLEAGSKSDYNGSSVPPRPLTELERTTKLVQQLESVEHEYESIINKLPRDC 507

  Fly   134 ------------------GVVRIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADY 180
                              |:..|.|.....|....|     .|.||.|..|.||:.||||.|.:|
Mosquito   508 SQIERMRTAGTANQPGDGGLYLIAPAEQHHPLMTQC-----FGEWTTVQRRQDGTVDFNRSWEEY 567

  Fly   181 KIGFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDY 245
            ..|||....||:||...||.:|..:...|.:.:|:......:|.|..|.|.|....:||: ||.|
Mosquito   568 AQGFGTPAGEFWIGNQALHHLTQDNCSRLRIVMQDIYDNTWFADYGSFRIDSRDGGFRLD-LGGY 631

  Fly   246 HGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFK 310
            .|:|:||.......:||..|...|.:..:||....|.:|: ..|...|..|.|.          .
Mosquito   632 SGNASDAFEYQNHMQFSAIDVDRDISNTHCAGNYEGGWWF-SHCQHANLNGRYN----------L 685

  Fly   311 GILWRGFLNGPKGSLKIVRMMVRPR 335
            |:.|.........::|...||:..|
Mosquito   686 GLTWFDASRNEWIAVKSSHMMIARR 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 64/253 (25%)
scaXP_061500368.1 None

Return to query results.
Submit another query.