DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and tnn

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_005171321.1 Gene:tnn / 30234 ZFINID:ZDB-GENE-990415-262 Length:1020 Species:Danio rerio


Alignment Length:294 Identity:95/294 - (32%)
Similarity:136/294 - (46%) Gaps:44/294 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASPNALASRFPFSHNSLDIEP 110
            |||||....:.:...||    ..||.:.::|:.    :...||      ||.:||....      
Zfish   754 ALSGLEMGKKYIVTLIA----YRGSKRSKIVET----TFSTVG------LAYQFPMDCT------ 798

  Fly   111 QLLANGGAAAVPITPANCLKQQHGVVRIRPRSN-VEPFFVFCDQKVRNGGWTMVVNRYDGSEDFN 174
            |::.||             ..:.||..|...:| .....|:||.|...|||.:...|..|..||.
Zfish   799 QIMRNG-------------NMESGVYTIYVNNNRSRTMQVYCDMKTDGGGWIVFQRRNTGKVDFM 850

  Fly   175 RKWADYKIGFGPLTTEFFIGLDKLHQITSS-DNYELLVQLQNRKQELRYALYDHFSIGSESEQYR 238
            :||.||..|||.||.||::||||:|::|:: ..||....| ....:.:||:||:|.:....::::
Zfish   851 KKWRDYMKGFGELTEEFWLGLDKIHELTNTPTQYEARFDL-GSGSDRKYAVYDNFKVAPSKQKFK 914

  Fly   239 LNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLE 303
            |.: |.|.|:|.||:..|.|..|||.|..||....|||....||:|| .:|:|.|..|.:..  .
Zfish   915 LTI-GSYKGNAGDAMTYHQGAPFSTVDSDNDIALGNCALTHQGAWWY-KNCHLANLNGRFGD--N 975

  Fly   304 RDVDGFKGILWRGFLNGPKGSLKIVRMMVRPRAA 337
            |...|.....|:|.|.    ||....:.:||..|
Zfish   976 RHSMGVNWEPWKGHLQ----SLDFAEIKIRPVGA 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 74/213 (35%)
tnnXP_005171321.1 EGF_alliinase <133..163 CDD:398501
EGF_Tenascin 163..190 CDD:480934
EGF_Tenascin 194..221 CDD:480934
EGF_Tenascin 225..252 CDD:480934
fn3 257..333 CDD:394996
fn3 347..426 CDD:394996
FN3 405..818 CDD:442628 22/96 (23%)
FReD 792..1003 CDD:238040 79/238 (33%)
Blue background indicates that the domain is not in the aligned region.

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