DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and tncb

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001299845.1 Gene:tncb / 30037 ZFINID:ZDB-GENE-980526-104 Length:1811 Species:Danio rerio


Alignment Length:335 Identity:102/335 - (30%)
Similarity:154/335 - (45%) Gaps:41/335 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STTQTDLGGGLLVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAG 82
            :.|.||....:..|.:|. ||:.....:.|:....| ..::..|.|.:...|.::|.::      
Zfish  1487 AATSTDFTTDVDAPQNLA-ASNIQTETAMLTWKPPR-ADISGYILSFESADGVVKEVVL------ 1543

  Fly    83 SAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPIT-----------PANCLK------ 130
             :|.....|.:.|.:...::     ::.|.:|....:.|..|           |.:|.:      
Zfish  1544 -SPTATFYSMSQLTASTEYT-----VKLQAIAGPKRSRVISTVFLTIGVLYKHPKDCSQALLNGD 1602

  Fly   131 QQHGVVRIRPRSN-VEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIG 194
            ...|:..|..|.: .:|..|:||.....|||.:.|.|..|..:|.|.|.:|..|||.|..||::|
Zfish  1603 TTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLG 1667

  Fly   195 LDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGK 259
            |..||:|||...|||.|.|:: |.|..||.||.|||.....:|:::| |.|.|.|.|::..|.|:
Zfish  1668 LSNLHKITSFGQYELRVDLRD-KGESAYAQYDKFSISEPRARYKVHV-GGYSGTAGDSMTYHHGR 1730

  Fly   260 KFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGS 324
            .|||:|..||....|||....||||| .:|:..|..|.|     .|....||:.|..: .|.:.|
Zfish  1731 PFSTYDNDNDIAVTNCALSYKGAFWY-KNCHRVNIMGRY-----GDNSHSKGVNWFHW-KGHEHS 1788

  Fly   325 LKIVRMMVRP 334
            ::...|.:||
Zfish  1789 VEFAEMKIRP 1798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 83/230 (36%)
tncbNP_001299845.1 EGF_Tenascin 225..252 CDD:480934
EGF_Tenascin 256..283 CDD:480934
EGF_Tenascin 318..345 CDD:480934
EGF_Tenascin 380..407 CDD:480934
PRK10767 <471..>544 CDD:236757
EGF_Tenascin 535..562 CDD:480934
EGF_Tenascin 566..593 CDD:480934
EGF_Tenascin 597..623 CDD:480934
EGF_Tenascin 628..655 CDD:480934
EGF_Tenascin 659..686 CDD:480934
FN3 <689..>908 CDD:442628
FN3 <853..1296 CDD:442628
FN3 <1333..>1568 CDD:442628 17/94 (18%)
FReD 1589..1798 CDD:238040 80/217 (37%)
Blue background indicates that the domain is not in the aligned region.

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