DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Mfap4

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_006246622.1 Gene:Mfap4 / 287382 RGDID:1307841 Length:281 Species:Rattus norvegicus


Alignment Length:235 Identity:86/235 - (36%)
Similarity:108/235 - (45%) Gaps:39/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QQHGVVRIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFG---------- 185
            |:.||..|.|.....|..||||.....|.||:...|::||..|.|.|.|||:|||          
  Rat    52 QEDGVYLIYPYGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGK 116

  Fly   186 --------PLTTEF------FIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSI-----G 231
                    ||...:      ::||..||.:|....|||.|.|::.:....||.|..|||     .
  Rat   117 VGSWGGGCPLANSWLTSCHPYLGLQNLHLLTLKQKYELRVDLEDFENNTAYAKYVDFSISPNAVS 181

  Fly   232 SESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFG 296
            :|.:.|.|.|.|...|.|.|:|..|:|:||||.||..|...|||||..|||||: .||:..|..|
  Rat   182 AEEDGYTLYVAGFEDGGAGDSLSYHSGQKFSTFDRDQDLFVQNCAALSSGAFWF-RSCHFANLNG 245

  Fly   297 LY---QRLLERDVDGFKGILWRGFLNGPKGSLKIVRMMVR 333
            .|   ..|  ...:|.....|:||..    |||...|.:|
  Rat   246 FYLGGSHL--SYANGINWAQWKGFYY----SLKRTEMKIR 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 86/235 (37%)
Mfap4XP_006246622.1 FReD 38..280 CDD:238040 86/235 (37%)

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