DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1889 and CG30281

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_726164.1 Gene:CG30281 / 246525 FlyBaseID:FBgn0050281 Length:291 Species:Drosophila melanogaster


Alignment Length:329 Identity:105/329 - (31%)
Similarity:153/329 - (46%) Gaps:78/329 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LGGGLLVPPSLGNASSSSCPV------SALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAG 82
            |.||.|    |..|.|:...:      |.:|.|..|::.|......:.|:.|             
  Fly    11 LSGGSL----LSTAQSNKLDLVYKKAESMVSSLKIRLEELKQSYKEITEERG------------- 58

  Fly    83 SAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQQHGV----VRIRPRSN 143
                               ||.:                 |.|::||..  |:    :.:.....
  Fly    59 -------------------SHET-----------------INPSSCLAA--GINSNGIHVIEVPG 85

  Fly   144 VEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYE 208
            :|||.|:||.::...|||::..|.||||:|.|.|.:|..|||.|:.|||:||:|||.:|:::.||
  Fly    86 LEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQGFGELSGEFFMGLEKLHFLTTAEPYE 150

  Fly   209 LLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQ 273
            |.|.:::....:..|.|:.|:||:.|..|.|:|||.|.|||.|:||.|.|..|||.|  :|:...
  Fly   151 LFVYMEDFNGVVHDARYEDFAIGNASASYALSVLGKYSGDAGDSLRYHKGMPFSTFD--HDDTGH 213

  Fly   274 NCAAQQSGAFWYGGSCNLTNPFGLYQR--LLERDVDGFKGIL---WRGFLNGPKGSLKIVRMMVR 333
            .||....||:|| ..|..:|..|.|..  ..|..:.| :||.   |||:..|    .|.|:||:|
  Fly   214 GCARIYVGAWWY-DQCQRSNLNGQYLEGGRFEPKMSG-RGITWMSWRGYDYG----YKFVQMMIR 272

  Fly   334 PRAA 337
            |:.:
  Fly   273 PKCS 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 88/220 (40%)
CG30281NP_726164.1 FReD 63..274 CDD:238040 88/220 (40%)

Return to query results.
Submit another query.