DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Fgg

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_006232587.1 Gene:Fgg / 24367 RGDID:2613 Length:445 Species:Rattus norvegicus


Alignment Length:330 Identity:91/330 - (27%)
Similarity:138/330 - (41%) Gaps:79/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PPSLGNASSSSCPVSALSGLTTRMQSLNNEI---------------------ASVKEQIGSLQEQ 74
            ||..|          .:.|.|.:.:.:..||                     .|.|::|.:|:::
  Rat    99 PPKPG----------MIEGATQKSKKMVEEILKYEALLLTHESSIRYLQDIYTSNKQKITNLKQK 153

  Fly    75 LVDLRRAGSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQQHGVVRIR 139
            :..|......|......          .|::...:.|.:||.||            ::.|:..||
  Rat   154 VAQLEAQCQEPCKDSVR----------IHDTTGKDCQDIANKGA------------KESGLYFIR 196

  Fly   140 PRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPL----TTEFFIGLDKLHQ 200
            |....:.|.|:|:......|||::..|.|||.||.:.|..||.|||.|    ||||::|.:|:|.
  Rat   197 PLKATQQFLVYCEIDGSGNGWTVLQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHL 261

  Fly   201 IT--SSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADA----------- 252
            |:  |:..|.|.:||::.......|.|..|.:|.||::|||.......|||.||           
  Rat   262 ISMQSTIPYALRIQLKDWSGRTSTADYAMFRVGPESDKYRLTYAYFIGGDAGDAFDGYDFGDDPS 326

  Fly   253 ---LRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQR----LLERDVDGF- 309
               ...|.|..|||.|..||:.|.|| |:|.|:.|:...|:..:..|:|.:    ......:|: 
  Rat   327 DKFFTSHNGMHFSTWDNDNDKFEGNC-AEQDGSGWWMNKCHAGHLNGVYYQGGTYSKSSTPNGYD 390

  Fly   310 KGILW 314
            .||:|
  Rat   391 NGIIW 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 72/217 (33%)
FggXP_006232587.1 Fib_alpha 30..172 CDD:462570 13/92 (14%)
Fibrinogen_C 175..414 CDD:395095 77/234 (33%)

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