DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Tnc

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001356140.1 Gene:Tnc / 21923 MGIID:101922 Length:2110 Species:Mus musculus


Alignment Length:308 Identity:95/308 - (30%)
Similarity:142/308 - (46%) Gaps:51/308 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LLVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASP 92
            ::|.|.  ..|.|...:|..:..:.|:|:|:          |||:.:|:..    ....:||.  
Mouse  1840 VIVGPD--TTSYSLADLSPSTHYSARIQALS----------GSLRSKLIQT----IFTTIGLL-- 1886

  Fly    93 NALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQQHGVVRIRPRSN-VEPFFVFCDQKVR 156
                  :||..:.    .|.:.||...:             |:..|....: .:...|:||....
Mouse  1887 ------YPFPRDC----SQAMLNGDTTS-------------GLYTIYINGDKTQALEVYCDMTSD 1928

  Fly   157 NGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELR 221
            .|||.:.:.|.:|.|||.|.|..|..|||....||::|||.|.:||:...|||.|.||:. .|..
Mouse  1929 GGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQDH-GESA 1992

  Fly   222 YALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYG 286
            ||:||.||:|....:|:|.|.| |.|.|.|::..|.|:.|||:|:..|....|||....||||| 
Mouse  1993 YAVYDRFSVGDAKSRYKLKVEG-YSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWY- 2055

  Fly   287 GSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKIVRMMVRP 334
            .:|:..|..|.|     .|.:..:|:.|..: .|.:.|::...|.:||
Mouse  2056 KNCHRVNLMGRY-----GDNNHSQGVNWFHW-KGHEYSIQFAEMKLRP 2097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 76/213 (36%)
TncNP_001356140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..91
EGF_Tenascin 190..217 CDD:480934
EGF_Tenascin 252..280 CDD:480934
EGF_Tenascin 284..311 CDD:480934
EGF_Tenascin 346..373 CDD:480934
EGF_2 380..403 CDD:400365
EGF_Tenascin 408..435 CDD:480934
EGF_Tenascin 439..466 CDD:480934
EGF_Tenascin 470..496 CDD:480934
EGF_Tenascin 501..528 CDD:480934
EGF_2 535..558 CDD:400365
EGF_Tenascin 563..589 CDD:480934
EGF_Tenascin 594..621 CDD:480934
FN3 624..710 CDD:238020
fn3 713..793 CDD:394996
FN3 804..891 CDD:238020
FN3 <861..1244 CDD:442628
fn3 1257..1336 CDD:394996
FN3 1322..1888 CDD:442628 14/71 (20%)
fn3 1530..1610 CDD:394996
FN3 1620..1706 CDD:238020
fn3 1797..1869 CDD:394996 8/40 (20%)
Fibrinogen_C 1889..2098 CDD:395095 80/235 (34%)
Blue background indicates that the domain is not in the aligned region.

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