DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Y43C5A.2

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_501883.1 Gene:Y43C5A.2 / 177911 WormBaseID:WBGene00012782 Length:452 Species:Caenorhabditis elegans


Alignment Length:235 Identity:58/235 - (24%)
Similarity:90/235 - (38%) Gaps:37/235 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 APVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLK----QQHGVVRIRPRSNV 144
            :|....::|....:..||:.::|.          ....|..|.:|.:    ...||..|.|  |.
 Worm   164 SPPSTTSTPEPTTTEVPFTGSTLP----------PTTTPKPPMDCSEISNLTSSGVQTIYP--NG 216

  Fly   145 EPFFVFCDQKVRNGGWTMVVNRYDGSEDFN-----RKWADYKIGFGPLTTEFFIGLDKLHQITSS 204
            .|..|:|| ....|.:|::.:|....|:.|     .|:.|. ||.....|.|:.|||.::.::.:
 Worm   217 SPVQVYCD-TTSYGTYTVIQSRGATGENVNFNITYDKYTDI-IGTPGKETNFWFGLDNMNHLSGA 279

  Fly   205 DNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHT--GKKFSTHDRV 267
            ..|.|.:.|......:...:|..|.:|:....|.|....|..|........:|  |.||||.|..
 Worm   280 KPYRLQIDLCCGTLLVAKQIYHSFKVGTAEYGYNLTATADISGIGLAYSSTYTDLGAKFSTFDNF 344

  Fly   268 N--------DE----NEQNCAAQQSGAFWYGGSCNLTNPF 295
            .        ||    ::....:|..|.:|||...|..|.|
 Worm   345 TGPLGKDDCDEFQYFDDSGVQSQPYGGWWYGSCGNNLNGF 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 52/196 (27%)
Y43C5A.2NP_501883.1 FReD 196..438 CDD:238040 51/193 (26%)

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