DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and LOC116406488

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_031759513.1 Gene:LOC116406488 / 116406488 XenbaseID:XB-GENE-29091515 Length:238 Species:Xenopus tropicalis


Alignment Length:235 Identity:84/235 - (35%)
Similarity:111/235 - (47%) Gaps:23/235 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LLANG--GAAAVPITPANCLK-QQHGVV-----RIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYD 168
            ||:.|  |.:.:.....||.: ...|||     .|.| ..:.|..|.||.....|||.:...|||
 Frog    14 LLSTGEKGTSNLSYVARNCKELLDQGVVMSGWYTIYP-DGMAPLQVLCDMDTDGGGWIVFQRRYD 77

  Fly   169 GSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSE 233
            ||.||...|..|:.|||...|||::|.|.|...||:..:|:.|.::.......||.|..|.:..|
 Frog    78 GSVDFYLGWDSYRRGFGSRLTEFWLGNDNLSNFTSAGTWEMRVDMKYYDNIQHYAKYSSFKVLPE 142

  Fly   234 SEQYRLNVLGDY-HGDAADALRDHTGKKFSTHDRVNDENE-QNCAAQQSGAFWYGGSCNLTNPFG 296
            |:.||| ::|.| .|||.|::......||:|.||.||:.. .|||....||:|| .||...|..|
 Frog   143 SDSYRL-IIGPYVAGDAGDSIIRTNYSKFTTKDRDNDDMPVDNCADFGHGAWWY-TSCYNANLNG 205

  Fly   297 LYQRLLERDVDGF--KGILWRGFLNGPKGSLKIVRMMVRP 334
            ||.      :.|:  :...|  ...|...|||...|.:||
 Frog   206 LYL------IQGYSIQSNCW--LTLGNYYSLKFSEMKMRP 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 80/222 (36%)
LOC116406488XP_031759513.1 FReD 30..237 CDD:238040 78/217 (36%)

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