DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and Fcnb

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_446086.1 Gene:Fcnb / 114091 RGDID:621222 Length:319 Species:Rattus norvegicus


Alignment Length:189 Identity:72/189 - (38%)
Similarity:99/189 - (52%) Gaps:6/189 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 PFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYELL 210
            |..|.||.....||||:...|.||:.||.|.|..||.|||....||::|.|.:|.:|:....||.
  Rat   134 PLTVLCDMDTDGGGWTVFQRRIDGTVDFFRDWTSYKQGFGSQLGEFWLGNDNIHALTTQGTNELR 198

  Fly   211 VQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDY-HGDAADALRDHTGKKFSTHDRVNDENEQN 274
            |.|.:......:|.|..|.|..|:|:|:| :||:: .|.|.|:|.......|||.|:.||:...|
  Rat   199 VDLADFDGNHDFAKYSSFQIQGEAEKYKL-ILGNFLGGGAGDSLTSQNNMLFSTKDQDNDQGSSN 262

  Fly   275 CAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKIVRMMVR 333
            ||.:..||:|| ..|:.:|..|||.|.|.:..  ..|:.|:.: .|...|.|:..|.||
  Rat   263 CAVRYHGAWWY-SDCHTSNLNGLYLRGLHKSY--ANGVNWKSW-KGYNYSYKVSEMKVR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 72/189 (38%)
FcnbNP_446086.1 Collagen 45..100 CDD:460189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..106
FReD 108..317 CDD:238040 70/187 (37%)
Blue background indicates that the domain is not in the aligned region.

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