DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1889 and LOC105947509

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_031760299.1 Gene:LOC105947509 / 105947509 XenbaseID:XB-GENE-29089583 Length:304 Species:Xenopus tropicalis


Alignment Length:192 Identity:70/192 - (36%)
Similarity:99/192 - (51%) Gaps:11/192 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 VEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYE 208
            :.|..|.||.....|||.:...|:||:..||..|..||.|||....||::|.|.|:.:|||..:|
 Frog   118 MSPLRVLCDMHTDGGGWLVFQRRWDGTVSFNVDWNTYKRGFGSEMNEFWLGNDILYNLTSSGTWE 182

  Fly   209 LLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYH-GDAADALRDHTGKKFSTHDRVNDENE 272
            |.:.|::....:.||.|..|.|..|...|.| :||.|: |:..|:|..|....|||:||.|:...
 Frog   183 LRIDLRDFDNNMYYAKYSFFQILGEDNNYTL-LLGSYNEGNIGDSLTPHNTVPFSTYDRDNNFLL 246

  Fly   273 QNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILW----RGFLNGPKGSLKIVRM 330
            :|||....|.:|| .:|..:|..||| ||::.:.   .||.|    |...:.....:||.|:
 Frog   247 ENCAFDNQGGWWY-NNCYQSNLNGLY-RLVQNNE---TGINWLSDGRNHYSYKSSEMKIRRL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 70/192 (36%)
LOC105947509XP_031760299.1 Collagen <65..88 CDD:460189
FReD 93..303 CDD:238040 69/190 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.