DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and mfap4.8

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_003197840.1 Gene:mfap4.8 / 100538028 ZFINID:ZDB-GENE-121214-168 Length:243 Species:Danio rerio


Alignment Length:206 Identity:81/206 - (39%)
Similarity:114/206 - (55%) Gaps:8/206 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 GVVRIRPRSNVEPFFVFC----DQKV-RNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFI 193
            |:..|.|..:. |.:|:|    |.|| .|.|||:...|.|||..|.:.|..|:||||....|:::
Zfish    39 GIYSIYPAGDT-PVWVYCQMVSDGKVEENEGWTVFQRRMDGSIHFFQLWEKYRIGFGTTEGEYWL 102

  Fly   194 GLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTG 258
            ||:.|:|:|....:.|.|.|::......:|.|..||:|||.|.|:|.:.|...|.|.|:|..|.|
Zfish   103 GLENLYQLTRHKKFMLRVDLEDFTGRRGFAQYSSFSVGSEVEGYKLELSGFTDGGAGDSLSYHNG 167

  Fly   259 KKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKG 323
            .||||:||..|.||.|||..:.|||||.| ||..||.|:|....::..:|. .|.|..:.|..:.
Zfish   168 MKFSTYDRDQDTNEDNCARMRLGAFWYKG-CNYANPNGVYLWGEDKSKNGI-AINWYTWKNDNET 230

  Fly   324 SLKIVRMMVRP 334
            .:|.:.|.::|
Zfish   231 PMKFITMKIKP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 81/206 (39%)
mfap4.8XP_003197840.1 FReD 24..242 CDD:238040 81/206 (39%)

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