DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and tnxba

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_021322558.1 Gene:tnxba / 100536295 ZFINID:ZDB-GENE-070103-5 Length:2285 Species:Danio rerio


Alignment Length:217 Identity:76/217 - (35%)
Similarity:111/217 - (51%) Gaps:16/217 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 PANCLK------QQHGVVRIRPR-SNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKI 182
            |.:|.:      ::.|...|.|. .|.||..|:||.:...|.||:...|.|||.||.|.|.||..
Zfish  2063 PTDCSEVQINGMKESGEAEIYPEGKNGEPVRVYCDMETDGGAWTVFQRRMDGSTDFFRSWRDYSK 2127

  Fly   183 GFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHG 247
            |||.|:.||::|.|.||.:||.....|.:.|:: ..:..:|.|.:|:|.||:..|.:::.| |.|
Zfish  2128 GFGLLSGEFWLGNDVLHTLTSLKAMSLRIDLRS-GNDTAFAQYINFNISSEANHYAIDLSG-YSG 2190

  Fly   248 DAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGI 312
            .|.|:::.|.|:.|||.|:..|....:||....|.:|| .:|...|..|||....:.     ||:
Zfish  2191 TAGDSMKYHKGRPFSTKDKDPDTLSIHCAKAYMGGWWY-KNCYKANLNGLYASYSDN-----KGV 2249

  Fly   313 LWRGFLNGPKGSLKIVRMMVRP 334
            :|..: .|...||....|.:||
Zfish  2250 VWIDW-KGKDASLPFTEMKLRP 2270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 76/217 (35%)
tnxbaXP_021322558.1 MSCRAMM_ClfA 219..>404 CDD:468110
PRK08581 596..>913 CDD:236304
EGF_2 1384..1406 CDD:400365
fn3 1792..1870 CDD:394996
fn3 1880..1952 CDD:394996
fn3 1976..2037 CDD:394996
FReD 2061..2270 CDD:238040 74/215 (34%)
Blue background indicates that the domain is not in the aligned region.

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