DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1889 and fgl1b

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_002936775.2 Gene:fgl1b / 100497330 XenbaseID:XB-GENE-5957151 Length:330 Species:Xenopus tropicalis


Alignment Length:321 Identity:92/321 - (28%)
Similarity:149/321 - (46%) Gaps:58/321 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAGSAPVVGLASPNALASR-FPFSHNS 105
            |.:..:. |..|:|.|.|::     .:|.|  .|.||  .|:       :.::|.|: |..|.:.
 Frog    26 CQIDNIK-LLQRIQVLQNQL-----HLGDL--HLRDL--LGN-------NYHSLKSKVFKSSSHR 73

  Fly   106 LDIEPQLLANGGAAAVPITPANCL-------------KQQHGVVRIRPRSNVEPFFVFCDQKVRN 157
            ..:|..||        |.|..|.:             :::.|..|:|||:..|||.||||.. ..
 Frog    74 SKVEDVLL--------PTTSGNLIVYNEDCSSVFESGRKESGYYRVRPRAENEPFLVFCDMS-DG 129

  Fly   158 GGWTMVVNRYDGSEDFNRKWADYKIGFGPLTT---EFFIGLDKLHQITSSDNYELLVQLQNRKQE 219
            ||||::..|.:|..:|||||.:||.|||...:   |.:||.:.::.:.......|.:.|.:.:..
 Frog   130 GGWTVIQRRSNGKVNFNRKWDEYKEGFGLFKSRNDEHWIGNNHIYDLLDKREMTLKIDLTDWQGN 194

  Fly   220 LRYALYDHFSIGSESEQYRLNVLGDYHGDAADAL-----------RDHTGKKFSTHDRVNDE-NE 272
            .::|:|:.|.:.:|.:.|:| .:|.|.|:|.|.|           ..|:|..|||.|:.||. .:
 Frog   195 AKHAIYETFRLTNEQDNYKL-WIGYYSGNAGDGLSGGSNFEQQWSASHSGMPFSTSDKDNDRFIK 258

  Fly   273 QNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSLKIVRMMVR 333
            .|||.:....:|: ..|:..|..|:|.:......:...||:|..: :|...|||...|.:|
 Frog   259 GNCAKENKCGWWF-NRCHAANLNGVYYKKGNYTGEFDNGIVWSPW-HGLWYSLKSTAMKIR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 72/239 (30%)
fgl1bXP_002936775.2 FReD 94..318 CDD:238040 70/228 (31%)

Return to query results.
Submit another query.